Vaa3D-x 用于跨平台的 teravoxel 规模的多维图像数据沉浸式探索。

Vaa3D-x for cross-platform teravoxel-scale immersive exploration of multidimensional image data.

机构信息

School of Computer Science and Engineering, Southeast University, Nanjing, Jiangsu, China.

Guangdong Institute of Intelligence Science and Technology, Hengqin, Guangdong, China.

出版信息

Bioinformatics. 2023 Jan 1;39(1). doi: 10.1093/bioinformatics/btac794.

DOI:10.1093/bioinformatics/btac794

PMID:36610985

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9832945/

Abstract

SUMMARY

Vaa3D is a software package that has been widely used to visualize and analyze multidimensional microscopic images in a number of cutting edge bioimage informatics applications. However, due to many recent updates of both software development environments and operating systems, it was highly requested to maintain Vaa3D and disseminate it on latest operating systems. In addition, there has never been a showcase about how to use Vaa3D's cross-platform visualization and immersive exploration functions for multidimensional and teravoxel-scale images. Here, we introduce a newly developed version of the software, called Vaa3D-x, to address all the above issues.

AVAILABILITY AND IMPLEMENTATION

Vaa3D-x is released in both binary and Open-Source available at vaa3d.org and GitHub (https://github.com/Vaa3D).

SUPPLEMENTARY INFORMATION

Supplementary data are available at Bioinformatics online.

摘要

Vaa3D 是一个软件包，它已被广泛用于在许多前沿生物影像信息学应用中可视化和分析多维微观图像。然而，由于软件开发环境和操作系统的许多最新更新，人们强烈要求维护 Vaa3D 并将其传播到最新的操作系统上。此外，还从未有过关于如何使用 Vaa3D 的跨平台可视化和沉浸式探索功能来处理多维和太字节规模图像的展示。在这里，我们引入了一个新开发的软件版本，称为 Vaa3D-x，以解决上述所有问题。