State Key Laboratory of Chemical Oncogenomics, Guangdong Provincial Key Laboratory of Chemical Biology, Tsinghua Shenzhen International Graduate School, Shenzhen 518055, China.
School of Pharmaceutical Sciences, Health Science Center, Shenzhen University, Shenzhen 518060, China.
Biosensors (Basel). 2023 Jan 2;13(1):78. doi: 10.3390/bios13010078.
miRNA is considered a novel biomarker for cancer diagnosis and due to its low level in vivo, the development of new detection methods for it has become a research hotspot in recent years. Here, we firstly found that miR-625-5p was significantly upregulated in colorectal cancer tissues by means of differential expression analysis of the dbDEMC database and clinical validation. Subsequently, it was found that miR-625-5p promoted cell proliferation and migration but inhibited apoptosis through phenotypic experiments; thus, we initially identified miR-625-5p as a potential biomarker for colorectal cancer. Moreover, in order to monitor slight changes in the miR-625-5p level, we developed a novel detection method for it based on strand displacement amplification (SDA). In this system, a hairpin was designed to recognize and pair with miR-625-5p, which was used as a primer to initiate SDA, and a large number of complementary DNAs were generated via cyclic amplification, followed by the addition of SYBR Gold to achieve quantitative analysis of miR-625-5p. Moreover, this method showed a good response to miR-625-5p with a detection limit of 8.6 pM and a dynamic range of 0.01 to 200 nM, and the specificity of it was verified using a set of other miRNAs as an interference. Finally, we set up different concentrations of biologic samples for detection to verify the practicability of the method. The results of this study indicate that this detection method has great potential in clinical diagnosis.
miRNA 被认为是癌症诊断的一种新型生物标志物,由于其在体内的水平较低,因此开发新的检测方法已成为近年来的研究热点。在这里,我们通过差异表达分析 dbDEMC 数据库和临床验证首先发现 miR-625-5p 在结直肠癌组织中显著上调。随后,通过表型实验发现 miR-625-5p 促进细胞增殖、迁移,而抑制细胞凋亡;因此,我们初步将 miR-625-5p 鉴定为结直肠癌的潜在生物标志物。此外,为了监测 miR-625-5p 水平的微小变化,我们基于链置换扩增(SDA)开发了一种新的 miR-625-5p 检测方法。在该系统中,设计了一个发夹结构来识别和配对 miR-625-5p,作为引物启动 SDA,通过循环扩增生成大量互补 DNA,然后加入 SYBR Gold 进行定量分析 miR-625-5p。此外,该方法对 miR-625-5p 具有良好的响应,检测限为 8.6 pM,动态范围为 0.01 至 200 nM,并用一组其他 miRNAs 作为干扰物验证了其特异性。最后,我们设置了不同浓度的生物样本进行检测,以验证该方法的实用性。本研究结果表明,该检测方法在临床诊断中具有很大的潜力。