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分析 L. 的核 DNA 含量和核型

Analysis of Nuclear DNA Content and Karyotype of L.

机构信息

Department of Field Crops, Faculty of Agriculture, Van Yuzuncu Yil University, 65090 Van, Turkey.

Department of Chemistry, University College at Alwajh, University of Tabuk, Tabuk 71491, Saudi Arabia.

出版信息

Genes (Basel). 2022 Dec 23;14(1):47. doi: 10.3390/genes14010047.

Abstract

The common bean ( L.), whose annual production is 26 million tons worldwide, is one of the main sources of protein and is known as one of the most important food sources. In this study, the karyotype variations and the genome size of four common bean genotypes in Turkey were investigated to determine whether the geographic variables in these regions affected the genome size and the karyotype parameters. In addition, it is known that as that the cytological and chromosomal parameters change under the influence of the climatic conditions of each region, appropriate and stable cytological methods for each plant facilitate and enable the determination of the chromosomal structure and the identification of specific chromosomes in the genotypes of the relevant region. Correct and valuable information such as this enables breeders and researchers to determine the correct shape and actual size of chromosomes. The genome size of the genotypes was measured with a flow cytometer, and chromosome analyses were performed with the squash method. For each genotype, the karyotype parameters, such as the number of somatic chromosomes, the Mean Total Chromosome Length (MTCL), the Mean Centromere Index (MCI), and the Mean Arm Ratio (MAR), were measured. The results showed that the highest and the lowest amounts of DNA per nucleus (3.28 pg and 1.49 pg) were observed in the Bitlis and Elaziğ genotypes. In addition, all genotype chromosome numbers were counted to be 2n = 2x = 22. The Mean Total Chromosome Length varied from 15.65 µm in Elaziğ to 34.24 µm in the Bitlis genotype. The Mean Chromosome Length ranged between 1.42 µm and 3.11 µm in the Elaziğ and Bitlis genotypes. The Hakkari and Van genotypes consist of eleven metacentric chromosomes, while the Bitlis and Elaziğ genotypes consist of ten metacentric chromosomes and one sub-metacentric chromosome. However, the Mean Centromere Index and Arm Ratio differed considerably among the genotypes. The highest (46.88) and the lowest (43.18) values of the Mean Centromere Index were observed in the Hakkari and Elaziğ genotypes, respectively. On the other hand, the lowest (1.15) and the highest (1.36) values of the Mean Arm Ratio were obtained in the Bitlis and Elaziğ genotypes, respectively. Eventually, intraspecies variations in genome size and chromosomal parameters were observed, and it was determined that the changes in nuclear DNA content and different chromosomal parameters among the four genotypes from four different regions of Turkey indicate the effect of climate change in the regions on these parameters. Such information in these areas can be used as useful information for the improvement of this plant and breeding programs.

摘要

菜豆(L.)是世界上年产量达 2600 万吨的主要蛋白质来源之一,被认为是最重要的食物来源之一。本研究旨在探讨土耳其四个菜豆基因型的核型变异和基因组大小,以确定这些地区的地理变量是否影响基因组大小和核型参数。此外,已知在每个地区的气候条件下,细胞学和染色体参数会发生变化,因此为每种植物找到合适且稳定的细胞学方法可以促进和实现相关区域基因型的染色体结构和特定染色体的鉴定。这些正确而有价值的信息使种植者和研究人员能够确定染色体的正确形状和实际大小。使用流式细胞仪测量基因型的基因组大小,并使用压片法进行染色体分析。对于每个基因型,测量核型参数,如体细胞染色体数、平均总染色体长度(MTCL)、平均着丝粒指数(MCI)和平均臂比(MAR)。结果表明,Bitlis 和 Elaziğ 基因型的每个核 DNA 含量最高(3.28pg 和 1.49pg),最低(1.42µm 和 3.11µm)。此外,所有基因型的染色体数均为 2n=2x=22。Elaziğ 的平均总染色体长度为 15.65µm,Bitlis 基因型的平均总染色体长度为 34.24µm。Hakkari 和 Van 基因型由 11 个中央着丝粒染色体组成,而 Bitlis 和 Elaziğ 基因型由 10 个中央着丝粒染色体和 1 个亚中央着丝粒染色体组成。然而,基因型之间的平均着丝粒指数和臂比差异很大。Hakkari 和 Elaziğ 基因型的平均着丝粒指数最高(46.88)和最低(43.18)。另一方面,Bitlis 和 Elaziğ 基因型的平均臂比最低(1.15)和最高(1.36)。最终,观察到种内基因组大小和染色体参数的变异,并确定土耳其四个不同地区的四个基因型的核 DNA 含量变化和不同的染色体参数表明气候变化对这些参数的影响。这些地区的此类信息可作为改进该植物和育种计划的有用信息。

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