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全基因组分析和转录因子家族在 中的表达。

Genome-Wide Analysis and Expression of the Transcription Factor Family in .

机构信息

Heilongjiang Provincial Key Laboratory of Oilfield Applied Chemistry and Technology, College of Bioengineering, Daqing Normal University, Daqing 163712, China.

出版信息

Genes (Basel). 2023 Jan 6;14(1):164. doi: 10.3390/genes14010164.

Abstract

The transcription factor is an important transcription factor in plants. In recent years, more genes have been identified in many plant species. However, the gene family has not yet been studied in . We identified 100 members of the gene family in (), named them ~ according to the positions of 21 chromosomes, and classified them into 9 subfamilies. In this study, the motif and gene structures were also relatively conserved in the same subfamilies. At the same time, we found a great deal related to the stress of cis-acting promoter regulatory elements (MBS, ABRE, and TC-rich repeat elements). qRT-PCR suggested that the gene family ( gene family in ) can regulate the response to salt, saline-alkali, and cold and freezing abiotic stresses. The current study provides original and detailed information about the gene family, which contributes to the functional characterization of proteins in other plants.

摘要

转录因子是植物中一种重要的转录因子。近年来,在许多植物物种中已经鉴定出更多的基因。然而,该基因家族尚未在 中进行研究。我们在 中鉴定了 100 个 基因家族成员(),根据 21 条染色体的位置将它们命名为 ~,并将它们分为 9 个亚家族。在这项研究中,相同亚家族中的基序和基因结构也相对保守。同时,我们发现了大量与逆境(MBS、ABRE 和 TC-丰富重复元件)顺式作用启动子调控元件相关的元件。qRT-PCR 表明, 基因家族( 基因家族)可以调节对盐、盐碱性和冷及冻生物胁迫的响应。本研究为 基因家族提供了原始而详细的信息,有助于其他植物中 蛋白的功能特征分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/88c5/9858933/1ed590b70056/genes-14-00164-g001.jpg

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