Suppr超能文献

遗传性视网膜疾病中无规卷曲区域的初步研究。

Initial Investigations of Intrinsically Disordered Regions in Inherited Retinal Diseases.

机构信息

Pediatric Ophthalmology & Adult Strabismus Service, Wills Eye Hospital, 840 Walnut Street, Philadelphia, PA 19107, USA.

Retina Service, Wills Eye Hospital and Mid Atlantic Retina, 840 Walnut Street, Philadelphia, PA 19107, USA.

出版信息

Int J Mol Sci. 2023 Jan 5;24(2):1060. doi: 10.3390/ijms24021060.

Abstract

Intrinsically disordered regions (IDRs) are protein regions that are unable to fold into stable tertiary structures, enabling their involvement in key signaling and regulatory functions via dynamic interactions with diverse binding partners. An understanding of IDRs and their association with biological function may help elucidate the pathogenesis of inherited retinal diseases (IRDs). The main focus of this work was to investigate the degree of disorder in 14 proteins implicated in IRDs and their relationship with the number of pathogenic missense variants. Metapredict, an accurate, high-performance predictor that reproduces consensus disorder scores, was used to probe the degree of disorder as a function of the amino acid sequence. Publicly available data on gnomAD and ClinVar was used to analyze the number of pathogenic missense variants. We show that proteins with an over-representation of missense variation exhibit a high degree of disorder, and proteins with a high amount of disorder tolerate a higher degree of missense variation. These proteins also exhibit a lower amount of pathogenic missense variants with respect to total missense variants. These data suggest that protein function may be related to the overall level of disorder and could be used to refine variant interpretation in IRDs.

摘要

无规卷曲区域(IDRs)是指无法折叠成稳定三级结构的蛋白质区域,使它们能够通过与各种结合伴侣的动态相互作用参与关键的信号转导和调节功能。了解 IDRs 及其与生物学功能的关联可能有助于阐明遗传性视网膜疾病(IRDs)的发病机制。这项工作的主要重点是研究 14 种与 IRDs 相关的蛋白质的无序程度及其与致病性错义变异数量的关系。Metapredict 是一种准确、高性能的预测器,可重现共识无序评分,用于探测无序程度作为氨基酸序列的函数。使用 gnomAD 和 ClinVar 上的公开可用数据来分析致病性错义变异的数量。我们表明,错义变异过度表达的蛋白质表现出高度的无序,并且无序程度高的蛋白质可以容忍更高程度的错义变异。与总错义变异相比,这些蛋白质的致病性错义变异数量也较少。这些数据表明,蛋白质功能可能与整体无序程度有关,并可用于细化 IRDs 中的变异解释。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbf1/9861917/c1a883090a8b/ijms-24-01060-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验