Suppr超能文献

与翼状胬肉和原发性干燥综合征相关的免疫关键基因。

Key Genes of Immunity Associated with Pterygium and Primary Sjögren's Syndrome.

机构信息

Department of Ophthalmology, Shanghai East Hospital, Tongji University School of Medicine, Shanghai 200120, China.

Department of Biochemistry and Molecular Biology, Tongji University School of Medicine, Shanghai 200120, China.

出版信息

Int J Mol Sci. 2023 Jan 20;24(3):2047. doi: 10.3390/ijms24032047.

Abstract

Pterygium and primary Sjögren's Syndrome (pSS) share many similarities in clinical symptoms and ocular pathophysiological changes, but their etiology is unclear. To identify the potential genes and pathways related to immunity, two published datasets, GSE2513 containing pterygium information and GSE176510 containing pSS information, were selected from the Gene Expression Omnibus (GEO) database. Differentially expressed genes (DEGs) of pterygium or pSS patients compared with healthy control conjunctiva, and the common DEGs between them were analyzed. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis were conducted for common DEGs. The protein-protein interaction (PPI) network was constructed using the STRING database to find the hub genes, which were verified in clinical samples. There were 14 co-upregulated DEGs. The GO and KEGG analyses showed that these common DEGs were enriched in pathways correlated with virus infection, antigen processing and presentation, nuclear factor-kappa B (NF-κB) and Th17 cell differentiation. The hub genes (, , , , and ) were selected by PPI construction. In the era of the COVID-19 epidemic, the relationship between virus infection, vaccination, and the incidence of pSS and pterygium growth deserves more attention.

摘要

翼状胬肉和原发性干燥综合征 (pSS) 在临床症状和眼表病理生理改变方面有许多相似之处,但病因尚不清楚。为了确定与免疫相关的潜在基因和途径,我们从基因表达综合数据库 (GEO) 中选择了两个已发表的数据集,GSE2513 包含翼状胬肉信息,GSE176510 包含 pSS 信息。分析比较翼状胬肉或 pSS 患者与健康对照结膜之间的差异表达基因 (DEGs),以及它们之间的共同 DEGs。对共同 DEGs 进行基因本体论 (GO) 和京都基因与基因组百科全书 (KEGG) 富集分析。使用 STRING 数据库构建蛋白质-蛋白质相互作用 (PPI) 网络以找到枢纽基因,并在临床样本中进行验证。有 14 个共同上调的 DEGs。GO 和 KEGG 分析表明,这些共同的 DEGs 富集在与病毒感染、抗原加工和呈递、核因子-κB (NF-κB) 和 Th17 细胞分化相关的途径中。通过 PPI 构建选择了枢纽基因 (、、、、和 )。在 COVID-19 疫情时代,病毒感染、疫苗接种与 pSS 和翼状胬肉生长发生率之间的关系值得更多关注。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddac/9916617/4cdcb7258984/ijms-24-02047-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验