Biological Resource Center, National Institute of Technology and Evaluation (NBRC), 2-5-8 Kazusakamatari, Kisarazu, Chiba 292-0818, Japan.
Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba 260-8673, Japan.
Int J Syst Evol Microbiol. 2023 Jun;73(6). doi: 10.1099/ijsem.0.005935.
Two novel actinobacteria, designated IFM 12276 and IFM 12275, were isolated from clinical specimens in Japan, and their taxonomic positions were investigated using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence comparisons revealed that strains IFM 12276 and IFM 12275 have completely identical 16S rRNA gene sequences and were closely related to members of the genus . The highest 16S rRNA gene sequence similarity was observed to (99.6 %) and (99.6 %), followed by (99.3 %) and (99.3 %). The whole-cell hydrolysates of strains IFM 12276 and IFM 12275 contained -diaminopimelic acid, arabinose and galactose. The acyl type of muramic acid was -glycolyl. The predominant isoprenoid quinone was MK-8(H, -cycl.) and the principal polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and phosphatidylinositol mannosides. Strains IFM 12276 and IFM 12275 contained mycolic acids that co-migrated with those from the type strain of . These chemotaxonomic features corresponded to those of the genus . Meanwhile, the differences in some phenotypic characteristics, along with the results of average nucleotide identity and digital DNA-DNA hybridization analyses, indicated that strains IFM 12276 and IFM 12275 should be distinguished from the recognized species of the genus . Therefore, these strains represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is IFM 12276 (=NBRC 115477=TBRC 17096).
两株新的放线菌,分别命名为 IFM 12276 和 IFM 12275,从日本的临床标本中分离得到,并采用多相分类法研究了它们的分类地位。基于 16S rRNA 基因序列比较的系统发育分析表明,菌株 IFM 12276 和 IFM 12275 的 16S rRNA 基因序列完全相同,与属内的成员密切相关。与菌株的 16S rRNA 基因序列相似度最高的是 (99.6%)和 (99.6%),其次是 (99.3%)和 (99.3%)。菌株 IFM 12276 和 IFM 12275 的全细胞水解产物含有 -二氨基庚二酸、阿拉伯糖和半乳糖。 muramic 酸的酰基类型为 -甘氨酰。主要的异戊烯醌为 MK-8(H , -环),主要的极性脂类为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰肌醇和磷脂酰肌醇甘露糖苷。菌株 IFM 12276 和 IFM 12275 含有与 模式株相同的分枝菌酸。这些化学分类特征与属内的特征相符。同时,一些表型特征的差异,以及平均核苷酸同一性和数字 DNA-DNA 杂交分析的结果,表明菌株 IFM 12276 和 IFM 12275 应与该属的已识别种区分开来。因此,这些菌株代表了一个新的种,属名 sp. nov.。模式菌株为 IFM 12276(=NBRC 115477=TBRC 17096)。