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渗透保护剂在抵抗高盐胁迫中起主要作用——来自代谢组学和蛋白质组学整合方法的见解

Osmoprotectants play a major role in the resistance to high levels of salinity stress-insights from a metabolomics and proteomics integrated approach.

作者信息

Rodrigues Neto Jorge Candido, Salgado Fernanda Ferreira, Braga Ítalo de Oliveira, Carvalho da Silva Thalliton Luiz, Belo Silva Vivianny Nayse, Leão André Pereira, Ribeiro José Antônio de Aquino, Abdelnur Patrícia Verardi, Valadares Leonardo Fonseca, de Sousa Carlos Antônio Ferreira, Souza Júnior Manoel Teixeira

机构信息

The Brazilian Agricultural Research Corporation, Embrapa Agroenergy, Brasília, DF, Brazil.

Graduate Program of Plant Biotechnology, Federal University of Lavras, Lavras, MG, Brazil.

出版信息

Front Plant Sci. 2023 Jun 13;14:1187803. doi: 10.3389/fpls.2023.1187803. eCollection 2023.

Abstract

INTRODUCTION

Purslane (Portulaca oleracea L.) is a non-conventional food plant used extensively in folk medicine and classified as a multipurpose plant species, serving as a source of features of direct importance to the agricultural and agri-industrial sectors. This species is considered a suitable model to study the mechanisms behind resistance to several abiotic stresses including salinity. The recently achieved technological developments in high-throughput biology opened a new window of opportunity to gain additional insights on purslane resistance to salinity stress-a complex, multigenic, and still not well-understood trait. Only a few reports on single-omics analysis (SOA) of purslane are available, and only one multi-omics integration (MOI) analysis exists so far integrating distinct omics platforms (transcriptomics and metabolomics) to characterize the response of purslane plants to salinity stress.

METHODS

The present study is a second step in building a robust database on the morpho-physiological and molecular responses purslane to salinity stress and its subsequent use in attempting to decode the genetics behind its resistance to this abiotic stress. Here, the characterization of the morpho-physiological responses of adult purslane plants to salinity stress and a metabolomics and proteomics integrative approach to study the changes at the molecular level in their leaves and roots is presented.

RESULTS AND DISCUSSION

Adult plants of the B1 purslane accession lost approximately 50% of the fresh and dry weight (from shoots and roots) whensubmitted to very high salinity stress (2.0 g of NaCl/100 g of the substrate). The resistance to very high levels of salinity stress increases as the purslane plant matures, and most of the absorbed sodium remains in the roots, with only a part (~12%) reaching the shoots. Crystal-like structures, constituted mainly by Na, Cl, and K, were found in the leaf veins and intercellular space near the stoma, indicating that this species has a mechanism of salt exclusion operating on the leaves, which has its role in salt tolerance. The MOI approach showed that 41 metabolites were statistically significant on the leaves and 65 metabolites on the roots of adult purslane plants. The combination of the mummichog algorithm and metabolomics database comparison revealed that the glycine, serine, and threonine, amino sugar and nucleotide sugar, and glycolysis/gluconeogenesis pathways were the most significantly enriched pathways when considering the total number of occurrences in the leaves (with 14, 13, and 13, respectively) and roots (all with eight) of adult plants; and that purslane plants employ the adaptive mechanism of osmoprotection to mitigate the negative effect of very high levels of salinity stress; and that this mechanism is prevalent in the leaves. The multi-omics database built by our group underwent a screen for salt-responsive genes, which are now under further characterization for their potential to promote resistance to salinity stress when heterologously overexpressed in salt-sensitive plants.

摘要

引言

马齿苋(Portulaca oleracea L.)是一种非传统食用植物,在民间医学中广泛应用,被归类为多用途植物物种,对农业和农工业部门具有直接重要意义。该物种被认为是研究包括盐胁迫在内的几种非生物胁迫抗性机制的合适模型。高通量生物学领域最近取得的技术进展为深入了解马齿苋对盐胁迫的抗性——这一复杂、多基因且仍未被充分理解的性状——打开了一扇新的机会之窗。目前仅有少数关于马齿苋单组学分析(SOA)的报告,迄今为止仅有一项多组学整合(MOI)分析,整合了不同的组学平台(转录组学和代谢组学)来表征马齿苋植物对盐胁迫的响应。

方法

本研究是构建关于马齿苋对盐胁迫的形态生理和分子响应的强大数据库并随后用于尝试解读其对这种非生物胁迫抗性背后遗传学的第二步。在此,展示了成年马齿苋植物对盐胁迫的形态生理响应特征以及一种代谢组学和蛋白质组学整合方法,以研究其叶和根在分子水平上的变化。

结果与讨论

当受到非常高的盐胁迫(2.0 g NaCl/100 g基质)时,B1马齿苋种质的成年植物地上部和根部的鲜重和干重损失约50%。随着马齿苋植物成熟,其对非常高盐胁迫水平的抗性增强,并且大部分吸收的钠保留在根部,只有一部分(约12%)到达地上部。在叶脉和气孔附近的细胞间隙中发现了主要由Na、Cl和K组成的晶体状结构,表明该物种在叶片上存在一种排盐机制,这在其耐盐性中发挥作用。多组学整合方法表明,41种代谢物在成年马齿苋植物的叶片上具有统计学意义,65种代谢物在根部具有统计学意义。将鳉鱼算法与代谢组学数据库比较相结合发现,考虑成年植物叶片(分别有14、13和13种)和根部(均有8种)中出现的总数时,甘氨酸、丝氨酸和苏氨酸、氨基糖和核苷酸糖以及糖酵解/糖异生途径是最显著富集的途径;马齿苋植物采用渗透保护的适应性机制来减轻非常高盐胁迫水平的负面影响;并且这种机制在叶片中普遍存在。我们团队构建的多组学数据库进行了盐响应基因筛选,目前正在对这些基因进行进一步表征,以研究它们在盐敏感植物中异源过表达时促进抗盐胁迫的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bde8/10296175/8a0ad8c73711/fpls-14-1187803-g001.jpg

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