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基于单细胞RNA测序数据的睾丸细胞中与新冠病毒相关的细胞因子及细胞间相互作用网络研究

Study on the cytokines related to SARS-Cov-2 in testicular cells and the interaction network between cells based on scRNA-seq data.

作者信息

Yu Fan, He Haihong, Huang Tingting, Zhou Yiwen

机构信息

Center of Clinical Laboratory Medicine, Shenzhen Hospital, Southern Medical University, Shenzhen, Guangdong, 518000, China.

Center of Clinical Laboratory Medicine, Shenzhen Hospital, Southern Medical University, No. 1333 Xinhu Road, Shenzhen, Guangdong, 518000, China.

出版信息

Open Life Sci. 2023 Aug 8;18(1):20220661. doi: 10.1515/biol-2022-0661. eCollection 2023.

Abstract

Inflammatory cytokine storms (CS) in COVID-19 patients are associated with elevated levels of 13 specific cytokines, potentially impacting male fertility by causing testicular cell damage and disrupting the immune microenvironment. Some patients present with scrotal discomfort and orchitis. However, few studies have explored cytokine expression in testicular cells and their role in cell-to-cell communication. In this study, we integrated single-cell sequencing data sets of testicular cells, annotating 20 cell clusters using marker genes and the Human Cell Landscape database. We constructed cell pseudo-chronological trajectories, hub genes, and analyzed the cytokine interaction network between sperm cells using CellChat. Our findings identified 12 types of testicular cells, with four cytokines (IL8, CCL2, CCL3, and TNF) potentially involved in immune processes. Pseudo-chronological trajectory analysis indicated IL8 and CCL3's essential roles in testicular macrophages and endothelial cell development, affecting the immune microenvironment. We determined eight key cytokines (IL1, IL2, IL4, IL6, CCL, CSF3, TNF, and IFN-II) functions in cell interaction networks. Network analysis of exogenous cytokines directly acting on testicular cells showed IL2 potentially affecting all testicular cells, suggesting a vital role in cell communication. This research offers valuable insights into CSs effects on testicular cells and their potential impact on male fertility during COVID-19 infection.

摘要

新冠病毒感染患者的炎症细胞因子风暴(CS)与13种特定细胞因子水平升高有关,可能通过导致睾丸细胞损伤和破坏免疫微环境来影响男性生育能力。一些患者出现阴囊不适和睾丸炎。然而,很少有研究探讨睾丸细胞中的细胞因子表达及其在细胞间通讯中的作用。在本研究中,我们整合了睾丸细胞的单细胞测序数据集,使用标记基因和人类细胞图谱数据库注释了20个细胞簇。我们构建了细胞拟时间轨迹、枢纽基因,并使用CellChat分析了精子细胞之间的细胞因子相互作用网络。我们的研究结果确定了12种类型的睾丸细胞,其中四种细胞因子(IL8、CCL2、CCL3和TNF)可能参与免疫过程。拟时间轨迹分析表明,IL8和CCL3在睾丸巨噬细胞和内皮细胞发育中起重要作用,影响免疫微环境。我们确定了八种关键细胞因子(IL1、IL2、IL4、IL6、CCL、CSF3、TNF和IFN-II)在细胞相互作用网络中的功能。对外源性细胞因子直接作用于睾丸细胞的网络分析表明,IL2可能影响所有睾丸细胞,提示其在细胞通讯中起重要作用。本研究为细胞因子风暴对睾丸细胞的影响及其在新冠病毒感染期间对男性生育能力的潜在影响提供了有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25bd/10426268/359bc8dc0120/j_biol-2022-0661-fig001.jpg

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