Mir Wajahat Rashid, Bhat Basharat Ahmad, Kumar Ashish, Dhiman Rohan, Alkhanani Mustfa, Almilaibary Abdullah, Dar Mohd Younis, Ganie Showkat Ahmad, Mir Manzoor Ahmad
Department of Bio-Resources, School of Biological Sciences, University of Kashmir, Srinagar, Jammu and Kashmir, India.
Department of Life Science, National Institute of Technology, Rourkela, Odisha, India.
Front Pharmacol. 2023 Sep 1;14:1135898. doi: 10.3389/fphar.2023.1135898. eCollection 2023.
Munz is an indigenous medicinal plant to India where its activity against cancer has not been previously investigated, and its specific interactions of bioactive compounds with vulnerable breast cancer drug targets remain largely unknown. Therefore, in the current study, we aimed to evaluate the anti-breast cancer activity of different extracts of against breast cancer and deciphering the molecular mechanism by Network Pharmacology combined with Molecular Docking and verification. The experimental plant was extracted with various organic solvents according to their polarity index. Phytocompounds were identified by High resolution-liquid chromatography-mass spectrometry (HR-LC/MS) technique, and SwissADME programme evaluated their physicochemical properties. Next, target(s) associated with the obtained bioactives or breast cancer-related targets were retrieved by public databases, and the Venn diagram selected the overlapping targets. The networks between overlapping targets and bioactive were visualized, constructed, and analyzed by STRING programme and Cytoscape software. Finally, we implemented a molecular docking test (MDT) using AutoDock Vina to explore key target(s) and compound(s). HR-LC/MS detected hundreds of phytocompounds, and few were accepted by Lipinski's rules after virtual screening and therefore classified as drug-like compounds (DLCs). A total of 464 potential target genes were attained for the nine quantitative phytocompounds and using Gene Cards, OMIM and DisGeNET platforms, 12063 disease targets linked to breast cancer were retrieved. With Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway enrichment, a total of 20 signalling pathways were manifested, and a hub signalling pathway (PI3K-Akt signalling pathway), a key target (Akt1), and a key compound (8-Hydroxycoumarin) were selected among the 20 signalling pathways via molecular docking studies. The molecular docking investigation revealed that among the nine phytoconstituents, 8-hydroxycoumarin showed the best binding energy (-9.2 kcal/mol) with the Akt1 breast cancer target. 8-hydroxycoumarin followed all the ADME property prediction using SwissADME, and 100 nanoseconds (ns) MD simulations of 8-hydroxycoumarin complexes with Akt1 were found to be stable. Furthermore, extracts also showed significant antioxidant and anticancer activity through studies. Our findings indicated for the first time that extracts could be used in the treatment of BC.
蒙兹是印度本土的药用植物,此前尚未对其抗癌活性进行研究,其生物活性化合物与易患乳腺癌的药物靶点之间的具体相互作用在很大程度上也不清楚。因此,在本研究中,我们旨在评估蒙兹不同提取物对乳腺癌的抗癌活性,并通过网络药理学结合分子对接和实验验证来解读其分子机制。根据极性指数,用各种有机溶剂对实验植物进行提取。通过高分辨率液相色谱 - 质谱联用(HR - LC/MS)技术鉴定植物化合物,并使用SwissADME程序评估其理化性质。接下来,通过公共数据库检索与获得的生物活性成分或乳腺癌相关靶点相关的靶点,维恩图选择重叠的靶点。通过STRING程序和Cytoscape软件对重叠靶点和生物活性成分之间的网络进行可视化、构建和分析。最后,我们使用AutoDock Vina进行分子对接试验(MDT)以探索关键靶点和化合物。HR - LC/MS检测到数百种植物化合物,经过虚拟筛选后,很少有化合物符合Lipinski规则,因此被归类为类药物化合物(DLCs)。从9种定量植物化合物中总共获得了464个潜在靶基因,并使用基因卡、OMIM和DisGeNET平台检索到12063个与乳腺癌相关的疾病靶点。通过京都基因与基因组百科全书(KEGG)通路富集,共显示出20条信号通路,通过分子对接研究在这20条信号通路中选择了一个核心信号通路(PI3K - Akt信号通路)、一个关键靶点(Akt1)和一个关键化合物(8 - 羟基香豆素)。分子对接研究表明,在这9种植物成分中,8 - 羟基香豆素与Akt1乳腺癌靶点的结合能最佳(-9.2千卡/摩尔)。8 - 羟基香豆素符合使用SwissADME进行的所有ADME性质预测,并且发现8 - 羟基香豆素与Akt1的复合物进行100纳秒(ns)的分子动力学模拟是稳定的。此外,蒙兹提取物通过实验研究也显示出显著的抗氧化和抗癌活性。我们的研究结果首次表明,蒙兹提取物可用于治疗乳腺癌。