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俄罗斯联邦基因致病性变异的流行病学及相关先天性无虹膜症的预期患病率:一项全国性研究。

Epidemiology of Gene Pathogenic Variants and Expected Prevalence of -Associated Congenital Aniridia across the Russian Federation: A Nationwide Study.

机构信息

Research Centre for Medical Genetics, 115522 Moscow, Russia.

Fyodorov Eye Microsurgery Federal State Institution Cheboksary Branch, 428028 Cheboksary, Russia.

出版信息

Genes (Basel). 2023 Nov 4;14(11):2041. doi: 10.3390/genes14112041.

Abstract

This study investigates the distribution of -associated congenital aniridia (AN) and WAGR syndrome across Russian Federation (RF) districts while characterizing gene variants. We contribute novel pathogenic variants and 11p13 chromosome region rearrangements to international databases based on a cohort of 379 AN patients (295 families, 295 probands) in Russia. We detail 100 newly characterized families (129 patients) recruited from clinical practice and specialized screening studies. Our methodology involves multiplex ligase-dependent probe amplification (MLPA) analysis of the 11p13 chromosome, gene Sanger sequencing, and karyotype analysis. We report novel findings on gene variations, including 67 intragenic variants and 33 chromosome deletions in the 100 newly characterized families. Our expanded sample of 295 AN families with 379 patients reveals a consistent global variant spectrum, including CNVs (copy number variants) of the 11p13 chromosome (31%), complex rearrangements (1.4%), nonsense (25%), frameshift (18%), and splicing variants (15%). No genetic cause of AN is defined in 10 patients. The distribution of patients across the Russian Federation varies, likely due to sample completeness. This study offers the first AN epidemiological data for the RF, providing a comprehensive variants spectrum. Based on earlier assessment of AN prevalence in the RF (1:98,943) we have revealed unexamined patients ranging from 55% to 87%, that emphases the need for increased awareness and comprehensive diagnostics in AN patient care in Russia.

摘要

本研究调查了俄罗斯联邦(RF)各地区与 - 相关的先天性无虹膜(AN)和 WAGR 综合征的分布情况,同时对 基因变异进行了特征分析。我们基于在俄罗斯的 379 名 AN 患者(295 个家庭,295 名先证者)队列,为国际数据库贡献了新的致病性变异和 11p13 染色体区域重排。我们详细描述了从临床实践和专门的筛查研究中招募的 100 个新特征化的家庭(129 名患者)。我们的方法包括对 11p13 染色体的多重连接依赖性探针扩增(MLPA)分析、 基因 Sanger 测序和核型分析。我们报告了关于 基因变异的新发现,包括在 100 个新特征化的家庭中的 67 个内含子 变异和 33 个染色体缺失。我们的 295 个 AN 家庭中有 379 名患者的扩展样本揭示了一致的全球 变异谱,包括 11p13 染色体的 CNVs(拷贝数变异)(31%)、复杂重排(1.4%)、无义(25%)、移码(18%)和剪接变异(15%)。在 10 名患者中未确定 AN 的遗传原因。患者在俄罗斯联邦的分布情况各不相同,这可能是由于样本完整性所致。本研究提供了 RF 首个 AN 流行病学数据,提供了全面的 变异谱。根据我们对 RF 中 AN 患病率的早期评估(1:98,943),我们发现了未检查的患者比例为 55%至 87%,这强调了在俄罗斯加强对 AN 患者护理的认识和全面诊断的必要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4aa0/10671545/4ee74a397fef/genes-14-02041-g001.jpg

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