TCM and Ethnomedicine Innovation & Development International Laboratory, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, School of Pharmacy, Hunan University of Chinese Medicine, Changsha 410208, China.
College of Biology, Hunan University, Changsha 410082, China.
Analyst. 2024 Jan 15;149(2):537-545. doi: 10.1039/d3an01521a.
8-oxo guanine DNA glycosylase (8-oxoG DNA glycosylase), a crucial DNA repair enzyme, is essential for maintaining genome integrity and preventing diseases caused by DNA oxidative damage. Imaging 8-oxoG DNA glycosylase in living cells requires a dependable technique. In this study, we designed a DNAzyme-modified DNA tetrahedral nanomachine (DTDN) powered by 8-oxoG restoration. Incorporating a molecular beacon probe (MB), the constructed platform was used for amplified monitoring of 8-oxoG DNA glycosylase. Under normal conditions, duplexing with a complementary strand modified with two 8-oxoG sites inhibited the activity of DNAzyme. The restoration of DNAzyme activity by the repair of intracellular 8-oxoG DNA glycosylase on 8-oxoG bases can initiate a signal amplification reaction. This detection system can detect 8-oxoG DNA glycosylase activity linearly between 0 and 20 U mL, with a detection limit as low as 0.52 U mL. Using this method, we were able to screen 14 natural compounds and identify 6 of them as 8-oxoG DNA glycosylase inhibitors. In addition, a novel approach was utilized to assess the activity of 8-oxoG DNA glycosylase in living cells. In conclusion, this method provides a universal tool for monitoring the activity of 8-oxoG DNA glycosylase and in living cells, which holds great promise for elucidating the enzyme's functionality and facilitating drug screening endeavors.
8-氧鸟嘌呤 DNA 糖基化酶(8-oxoG DNA glycosylase)是一种关键的 DNA 修复酶,对于维持基因组完整性和预防由 DNA 氧化损伤引起的疾病至关重要。在活细胞中对 8-oxoG DNA 糖基化酶进行成像需要一种可靠的技术。在本研究中,我们设计了一种由 8-oxoG 修复驱动的 DNA 酶修饰的 DNA 四面体形纳米机器(DTDN)。该构建的平台整合了分子信标探针(MB),用于放大监测 8-oxoG DNA 糖基化酶。在正常条件下,与两条 8-oxoG 位点修饰的互补链的双链化抑制了 DNA 酶的活性。细胞内 8-oxoG DNA 糖基化酶对 8-oxoG 碱基的修复可以启动信号放大反应,从而恢复 DNA 酶的活性。这种检测系统可以在线性范围内检测 0 到 20 U mL 之间的 8-oxoG DNA 糖基化酶活性,检测限低至 0.52 U mL。使用该方法,我们能够筛选 14 种天然化合物,并鉴定出其中 6 种为 8-oxoG DNA 糖基化酶抑制剂。此外,还采用了一种新方法来评估活细胞中 8-oxoG DNA 糖基化酶的活性。总之,该方法为监测 8-oxoG DNA 糖基化酶在活细胞中的活性提供了一种通用工具,这对于阐明该酶的功能以及促进药物筛选研究具有重要意义。