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基于基序的PageRank算法在穴位-疾病网络中识别关键节点

Identifying Key Node with Motif-Based PageRank on Acupoint-Disease Network.

作者信息

Yu Xuelong, Liu Xiao, Luo Li, Zhao Hai

机构信息

Engineering Research Center of Security Technology of Complex Network System, School of Computer Science and Engineering, Northeastern University, Shenyang 110169, China.

Beijing PERCENT Technology Group Co. Ltd., Beijing 100096, China.

出版信息

Evid Based Complement Alternat Med. 2023 Dec 4;2023:6101751. doi: 10.1155/2023/6101751. eCollection 2023.

Abstract

Existing research combines acupuncture theory with network science and proposes a new paradigm for the study of acupoint selection patterns-a key acupoint mining algorithm based on acupoint networks. However, the basic idea of this study for finding key acupoints is based on binary acupoint synergy relationships, which ignores the higher-order synergy among multiple acupoints and does not truly reflect the implicit patterns of each acupoint among meridian systems. Moreover, the mining results assessment method, which this new paradigm involves, does not have wide applicability and universality. In this paper, with the introduction of higher-order interactions between multiple acupoints, a high-specificity key acupoint mining algorithm based on 3-node motif is proposed in the acupoint-disease network (ADN). In response to the narrow applicability of the new research paradigm involving the evaluation of algorithms' measures, new and widely applicable and universal evaluation criteria are introduced in terms of resolution, network loss, and accuracy, respectively. Based on the principles of acupoint selection involved in acupuncture clinics in Chinese medicine, the acupoints involved in the data were divided into a total of 19 regions according to their distribution characteristics. From these 19 regions, we selected the key acupoints that have a large impact on the global network. Finally, we compared this algorithm with five other acupoint importance assessment algorithms in terms of resolution, network loss, and accuracy, respectively. The comprehensive results show that the algorithm identifies key acupoints with an accuracy of 63%, which is 14% to 21% higher than other existing methods. The key acupoints identified by the algorithm have a significant disruptive effect on the connectivity of the network, indicating that the key acupoints are at the core of the acupoint-disease network topology. They have a significant propagation influence on other acupoints, which means that the key acupoints have high-synergistic cooperation with other acupoints. Meanwhile, the stability and specificity of the algorithm ensure the reliability of the key acupoints. We believe that the key acupoints identified by the algorithm can be used as core acupoints from the perspective of network topology and high synergy of other acupoints, respectively, and help researchers explore targeted and high-impact combinations of acupoints to optimize existing acupuncture prescriptions under condition constraints.

摘要

现有研究将针灸理论与网络科学相结合,提出了一种新的穴位选择模式研究范式——基于穴位网络的关键穴位挖掘算法。然而,该研究寻找关键穴位的基本思想基于二元穴位协同关系,忽略了多个穴位之间的高阶协同作用,并未真正反映经络系统中各穴位的隐含模式。此外,这种新范式所涉及的挖掘结果评估方法缺乏广泛的适用性和普遍性。本文通过引入多个穴位之间的高阶相互作用,在穴位-疾病网络(ADN)中提出了一种基于三节点基序的高特异性关键穴位挖掘算法。针对新研究范式中算法度量评估适用性狭窄的问题,分别从分辨率、网络损失和准确性方面引入了新的、广泛适用且通用的评估标准。根据中医针灸临床选穴原则,将数据中涉及的穴位根据其分布特征共划分为19个区域。从这19个区域中,我们选取了对全局网络有较大影响的关键穴位。最后,我们分别从分辨率、网络损失和准确性方面将该算法与其他五种穴位重要性评估算法进行了比较。综合结果表明,该算法识别关键穴位的准确率为63%,比其他现有方法高14%至21%。该算法识别出的关键穴位对网络的连通性具有显著的破坏作用,表明关键穴位处于穴位-疾病网络拓扑结构的核心。它们对其他穴位具有显著的传播影响,这意味着关键穴位与其他穴位具有高协同合作关系。同时,算法的稳定性和特异性确保了关键穴位的可靠性。我们认为,从网络拓扑结构和其他穴位的高协同性角度来看,该算法识别出的关键穴位可作为核心穴位,有助于研究人员在条件约束下探索有针对性且影响较大的穴位组合,以优化现有的针灸处方。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7616/10718705/b93f853c688d/ECAM2023-6101751.001.jpg

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