Gladysh Natalya S, Bogdanova Alina S, Kovalev Maxim A, Krasnov George S, Volodin Vsevolod V, Shuvalova Anastasia I, Ivanov Nikita V, Popchenko Mikhail I, Samoilova Aleksandra D, Polyakova Aleksandra N, Dmitriev Alexey A, Melnikova Nataliya V, Karpov Dmitry S, Bolsheva Nadezhda L, Fedorova Maria S, Kudryavtseva Anna V
Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Vavilov Str., 32, 119991 Moscow, Russia.
Institute of Agrobiotechnology, Russian State Agrarian University-Moscow Timiryazev Agricultural Academy, 127434 Moscow, Russia.
Biology (Basel). 2023 Dec 12;12(12):1519. doi: 10.3390/biology12121519.
The white poplar ( L.) has good potential for a green economy and phytoremediation. Bioaugmentation using endophytic bacteria can be considered as a safe strategy to increase poplar productivity and its resistance to toxic urban conditions. The aim of our work was to find the most promising strains of bacterial endophytes to enhance the growth of white poplar in unfavorable environmental conditions. To this end, for the first time, we performed whole-genome sequencing of 14 bacterial strains isolated from the tissues of the roots of white poplar in different geographical locations. We then performed a bioinformatics search to identify genes that may be useful for poplar growth and resistance to environmental pollutants and pathogens. Almost all endophytic bacteria obtained from white poplar roots are new strains of known species belonging to the genera , , , , , , and . The genomes of the strains contain genes involved in the enhanced metabolism of nitrogen, phosphorus, and metals, the synthesis of valuable secondary metabolites, and the detoxification of heavy metals and organic pollutants. All the strains are able to grow on media without nitrogen sources, which indicates their ability to fix atmospheric nitrogen. It is concluded that the strains belonging to the genus and bacteria of the species have the best poplar growth-stimulating and bioaugmentation potential, and the roots of white poplar are a valuable source for isolation of endophytic bacteria for possible application in ecobiotechnology.
毛白杨(L.)在绿色经济和植物修复方面具有良好潜力。利用内生细菌进行生物强化可被视为提高杨树生产力及其对城市有毒环境抗性的一种安全策略。我们工作的目的是找到最有前景的内生细菌菌株,以在不利环境条件下促进毛白杨生长。为此,我们首次对从不同地理位置的毛白杨根组织中分离出的14株细菌菌株进行了全基因组测序。然后我们进行了生物信息学搜索,以鉴定可能对杨树生长以及对环境污染物和病原体抗性有用的基因。从毛白杨根中获得的几乎所有内生细菌都是属于、、、、、、属的已知物种的新菌株。这些菌株的基因组包含参与氮、磷和金属代谢增强、有价值的次生代谢物合成以及重金属和有机污染物解毒的基因。所有菌株都能够在无氮源的培养基上生长,这表明它们具有固定大气氮的能力。得出的结论是,属于属的菌株和物种的细菌具有最佳的杨树生长刺激和生物强化潜力,并且毛白杨的根是分离内生细菌的宝贵来源,可用于生态生物技术。