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水稻脱水响应细胞骨架蛋白质组揭示关键分子途径的重编程以介导代谢适应和细胞存活。

Dehydration-responsive cytoskeleton proteome of rice reveals reprograming of key molecular pathways to mediate metabolic adaptation and cell survival.

作者信息

Kumar Sunil, Chakraborty Subhra, Chakraborty Niranjan

机构信息

National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, Aruna Asaf Ali Marg, New Delhi, 110067, India.

National Institute of Plant Genome Research, Jawaharlal Nehru University Campus, Aruna Asaf Ali Marg, New Delhi, 110067, India.

出版信息

Plant Physiol Biochem. 2024 Feb;207:108359. doi: 10.1016/j.plaphy.2024.108359. Epub 2024 Jan 15.

Abstract

The plant cytoskeletal proteins play a key role that control cytoskeleton dynamics, contributing to crucial biological processes such as cell wall morphogenesis, stomatal conductance and abscisic acid accumulation in repercussion to water-deficit stress or dehydration. Yet, it is still completely unknown which specific biochemical processes and regulatory mechanisms the cytoskeleton uses to drive dehydration tolerance. To better understand the role of cytoskeleton, we developed the dehydration-responsive cytoskeletal proteome map of a resilient rice cultivar. Initially, four-week-old rice plants were exposed to progressive dehydration, and the magnitude of dehydration-induced compensatory physiological responses was monitored in terms of physicochemical indices. The organelle fractionation in conjunction with label-free quantitative proteome analysis led to the identification of 955 dehydration-responsive cytoskeletal proteins (DRCPs). To our knowledge, this is the first report of a stress-responsive plant cytoskeletal proteome, representing the largest inventory of cytoskeleton and cytoskeleton-associated proteins. The DRCPs were apparently involved in a wide array of intra-cellular molecules transportation, organelles positioning, cytoskeleton organization followed by different metabolic processes including amino acid metabolism. These findings presented open a unique view on global regulation of plant cytoskeletal proteome is intimately linked to cellular metabolic rewiring of adaptive responses, and potentially confer dehydration tolerance, especially in rice, and other crop species, in general.

摘要

植物细胞骨架蛋白在控制细胞骨架动力学方面发挥着关键作用,有助于细胞壁形态发生、气孔导度以及在水分亏缺胁迫或脱水反应中脱落酸积累等关键生物学过程。然而,细胞骨架利用哪些特定的生化过程和调控机制来驱动耐旱性仍然完全未知。为了更好地理解细胞骨架的作用,我们绘制了一个具有韧性的水稻品种的脱水响应细胞骨架蛋白质组图谱。最初,将四周龄的水稻植株暴露于渐进性脱水环境中,并根据物理化学指标监测脱水诱导的补偿性生理反应的程度。通过细胞器分级分离结合无标记定量蛋白质组分析,鉴定出955种脱水响应细胞骨架蛋白(DRCPs)。据我们所知,这是关于应激响应植物细胞骨架蛋白质组的首次报道,代表了细胞骨架和细胞骨架相关蛋白的最大清单。DRCPs显然参与了广泛的细胞内分子运输、细胞器定位、细胞骨架组织,随后是包括氨基酸代谢在内的不同代谢过程。这些发现为植物细胞骨架蛋白质组的全局调控提供了独特的视角,揭示了其与适应性反应的细胞代谢重编程密切相关,并可能赋予耐旱性,特别是在水稻和其他作物品种中。

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