Department of Biology, University of Ottawa, 30 Marie Curie, Station A, P.O. Box 450, Ottawa, ON K1N 6N5, Canada.
Ottawa Institute of Systems Biology, Ottawa, ON K1H 8M5, Canada.
Int J Mol Sci. 2024 Feb 7;25(4):2000. doi: 10.3390/ijms25042000.
The dynamic structures and varying functions of intrinsically disordered proteins (IDPs) have made them fascinating subjects in molecular biology. Investigating IDP abundance in different bacterial species is crucial for understanding adaptive strategies in diverse environments. Notably, thermophilic bacteria have lower IDP abundance than mesophiles, and a negative correlation with optimal growth temperature (OGT) has been observed. However, the factors driving these trends are yet to be fully understood. We examined the types of IDPs present in both mesophiles and thermophiles alongside those unique to just mesophiles. The shared group of IDPs exhibits similar disorder levels in the two groups of species, suggesting that certain IDPs unique to mesophiles may contribute to the observed decrease in IDP abundance as OGT increases. Subsequently, we used quasi-independent contrasts to explore the relationship between OGT and IDP abundance evolution. Interestingly, we found no significant relationship between OGT and IDP abundance contrasts, suggesting that the evolution of lower IDP abundance in thermophiles may not be solely linked to OGT. This study provides a foundation for future research into the intricate relationship between IDP evolution and environmental adaptation. Our findings support further research on the adaptive significance of intrinsic disorder in bacterial species.
无规卷曲蛋白质(IDP)的动态结构和多样的功能使其成为分子生物学中引人入胜的研究对象。研究不同细菌物种中 IDP 的丰度对于理解它们在不同环境中的适应策略至关重要。值得注意的是,与中温菌相比,嗜热菌的 IDP 丰度较低,并且观察到与最适生长温度(OGT)呈负相关。然而,驱动这些趋势的因素尚未得到充分理解。我们研究了中温菌和嗜热菌中存在的 IDP 类型,以及仅存在于中温菌中的 IDP 类型。两组物种中共享的 IDP 组表现出相似的无序水平,这表明某些仅存在于中温菌中的 IDP 可能导致随着 OGT 增加 IDP 丰度的减少。随后,我们使用准独立对比来探索 OGT 和 IDP 丰度演化之间的关系。有趣的是,我们没有发现 OGT 和 IDP 丰度对比之间存在显著关系,这表明嗜热菌中 IDP 丰度较低的进化可能不仅仅与 OGT 有关。本研究为进一步研究 IDP 演化与环境适应之间的复杂关系提供了基础。我们的发现支持对细菌物种中内在无序的适应性意义进行进一步研究。