Herbst Josephine, Li Qian-Qian, De Veylder Lieven
Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Center for Plant Systems Biology, VIB, Gent, Belgium.
Nat Plants. 2024 Apr;10(4):539-550. doi: 10.1038/s41477-024-01652-9. Epub 2024 Mar 19.
The plant DNA damage response (DDR) pathway safeguards genomic integrity by rapid recognition and repair of DNA lesions that, if unrepaired, may cause genome instability. Most frequently, DNA repair goes hand in hand with a transient cell cycle arrest, which allows cells to repair the DNA lesions before engaging in a mitotic event, but consequently also affects plant growth and yield. Through the identification of DDR proteins and cell cycle regulators that react to DNA double-strand breaks or replication defects, it has become clear that these proteins and regulators form highly interconnected networks. These networks operate at both the transcriptional and post-transcriptional levels and include liquid-liquid phase separation and epigenetic mechanisms. Strikingly, whereas the upstream DDR sensors and signalling components are well conserved across eukaryotes, some of the more downstream effectors are diverged in plants, probably to suit unique lifestyle features. Additionally, DDR components display functional diversity across ancient plant species, dicots and monocots. The observed resistance of DDR mutants towards aluminium toxicity, phosphate limitation and seed ageing indicates that gaining knowledge about the plant DDR may offer solutions to combat the effects of climate change and the associated risk for food security.
植物DNA损伤反应(DDR)途径通过快速识别和修复DNA损伤来维护基因组完整性,这些损伤若不修复,可能会导致基因组不稳定。最常见的情况是,DNA修复与短暂的细胞周期停滞同时发生,这使细胞能够在进行有丝分裂之前修复DNA损伤,但同时也会影响植物的生长和产量。通过鉴定对DNA双链断裂或复制缺陷作出反应的DDR蛋白和细胞周期调节因子,已清楚地表明这些蛋白和调节因子形成了高度互联的网络。这些网络在转录和转录后水平上都发挥作用,包括液-液相分离和表观遗传机制。引人注目的是,尽管上游DDR传感器和信号成分在真核生物中高度保守,但一些更下游的效应器在植物中却有所不同,这可能是为了适应独特的生活方式特征。此外,DDR成分在古老植物物种、双子叶植物和单子叶植物中表现出功能多样性。DDR突变体对铝毒性、磷限制和种子老化的抗性表明,了解植物DDR可能为应对气候变化的影响和相关的粮食安全风险提供解决方案。