Suppr超能文献

从感染软化病的家蚕日南品种中分离出的多重耐药性 sp. 菌株RAC1的基因组数据集

Genomic dataset of a multiple-drug resistant sp. strain RAC1 isolated from a flacherie infected Nistari race of L.

作者信息

Mondal Rittick, Dam Paulami, Chakraborty Joydeep, Shaw Shubhajit, Pradhan Sayantan, Das Sandip, Nesa Jannatun, Meena Khemraj, Ghati Amit, Chaudhuri Sandip Dev, Bhattacharjee Debjoy, Mandal Vivekananda, Sarkar Biraj, Mandal Amit Kumar

机构信息

Department of Sericulture, Raiganj University, North Dinajpur, West Bengal 733134, India.

Department of Microbiology, Raiganj University, North Dinajpur, West Bengal 733134, India.

出版信息

Data Brief. 2024 Mar 5;54:110293. doi: 10.1016/j.dib.2024.110293. eCollection 2024 Jun.

Abstract

Species belonging to the genus is a rod shaped Gram-negative bacteria emerged as an important silkworm pathogen with broad-level multi-drug resistance. The extensive usage of antimicrobials in sericulture farming is gradually leading to the emergence of multi-drug resistance (MDR) strains, posing a significant threat to the well-being of both L. and serifarmers. spp. with MDR level may gets transmitted from the infected silkworm to human handlers either via direct contact or through contaminated feces. To understand the emerging concern of antimicrobial resistance (AMR) in spp. provides insights into their genomic information. Here, we present the draft genome sequence data of sp. strain RAC1 isolated from a flacherie infected Nistari race of L. from the silkworm rearing house of Raiganj University, India and sequenced using the Illumina NovaSeq 6000 platform. The estimated genome size of the strain was 4494347 bp with a G + C content of 63.5%. The assembly of the genome generated 38 contigs with an N50 of 200 kb. Our data might help to reveal the genetic diversity, underlying mechanisms of AMR and virulence potential of spp. This draft-genome shotgun project has been deposited under the NCBI GenBank accession number NZ_JAUTXS000000000.

摘要

属于该属的物种是一种杆状革兰氏阴性细菌,已成为一种具有广泛多药耐药性的重要家蚕病原体。养蚕业中抗菌药物的广泛使用正逐渐导致多药耐药(MDR)菌株的出现,对家蚕和养蚕农民的健康构成重大威胁。具有MDR水平的该属物种可能通过直接接触或通过受污染的粪便从受感染的家蚕传播给人类处理者。了解该属物种中新兴的抗菌药物耐药性(AMR)问题有助于深入了解它们的基因组信息。在此,我们展示了从印度赖根杰大学养蚕场感染了脓病的尼斯塔里品种家蚕中分离出的该属某物种菌株RAC1的基因组序列草图数据,并使用Illumina NovaSeq 6000平台进行了测序。该菌株的估计基因组大小为4494347 bp,G + C含量为63.5%。基因组组装产生了38个重叠群,N50为200 kb。我们的数据可能有助于揭示该属物种的遗传多样性、AMR的潜在机制和毒力。这个基因组鸟枪法测序项目已存入NCBI GenBank,登录号为NZ_JAUTXS000000000。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8432/10957439/82febd151c69/ga1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验