Kent Tyler V, Schrider Daniel R, Matute Daniel R
Department of Biology, College of Arts and Sciences, University of North Carolina, Chapel Hill, NC, USA.
Department of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC, USA.
bioRxiv. 2024 Mar 12:2024.03.07.584008. doi: 10.1101/2024.03.07.584008.
is the main vector species of yellow fever, dengue, zika and chikungunya. The species is originally from Africa but has experienced a spectacular expansion in its geographic range to a large swath of the world, the demographic effects of which have remained largely understudied. In this report, we examine whole-genome sequences from 6 countries in Africa, North America, and South America to investigate the demographic history of the spread of into the Americas its impact on genomic diversity. In the Americas, we observe patterns of strong population structure consistent with relatively low (but probably non-zero) levels of gene flow but occasional long-range dispersal and/or recolonization events. We also find evidence that the colonization of the Americas has resulted in introduction bottlenecks. However, while each sampling location shows evidence of a past population contraction and subsequent recovery, our results suggest that the bottlenecks in America have led to a reduction in genetic diversity of only ~35% relative to African populations, and the American samples have retained high levels of genetic diversity (expected heterozygosity of ~0.02 at synonymous sites) and have experienced only a minor reduction in the efficacy of selection. These results evoke the image of an invasive species that has expanded its range with remarkable genetic resilience in the face of strong eradication pressure.
是黄热病、登革热、寨卡病毒病和基孔肯雅热的主要病媒物种。该物种原产于非洲,但在其地理分布范围上经历了惊人的扩张,覆盖了世界上很大一片区域,而其人口统计学影响在很大程度上仍未得到充分研究。在本报告中,我们研究了来自非洲、北美洲和南美洲6个国家的全基因组序列,以调查其传入美洲的人口统计学历史及其对基因组多样性的影响。在美洲,我们观察到强烈的种群结构模式,这与相对较低(但可能非零)的基因流动水平一致,但偶尔会出现长距离扩散和/或重新定殖事件。我们还发现证据表明,美洲的定殖导致了引入瓶颈。然而,虽然每个采样地点都显示出过去种群收缩和随后恢复的证据,但我们 的结果表明,美洲的瓶颈导致遗传多样性相对于非洲种群仅减少了约35%,而且美洲样本保留了高水平的遗传多样性(同义位点的预期杂合度约为0.02),并且在选择效率方面仅经历了轻微降低。这些结果让人联想到一个入侵物种的形象,它在面对强大的根除压力时,凭借显著的遗传恢复力扩大了其分布范围。