Wang Shengli, Zhang Mingyue, Sun Hongyan, Li Tao, Hao Jianlei, Fang Meixia, Dong Jie, Xu Hongbiao
Zhuhai Institute of Translational Medicine, Zhuhai People's Hospital Affiliated With Jinan University, Jinan University, Zhuhai, Guangdong, China.
The Biomedical Translational Research Institute, Faculty of Medical Science, Jinan University, Guangzhou, Guangdong, China.
Front Cell Dev Biol. 2024 Mar 15;11:1305906. doi: 10.3389/fcell.2023.1305906. eCollection 2023.
The TLC Domain Containing 1 (TLCD1) protein, a key regulator of phosphatidylethanolamine (PE) composition, is distributed across several cellular membranes, including mitochondrial plasma membranes. Existing research has revealed the impact of TLCD1 on the development of non-alcoholic fatty liver disease. However, there remains a gap in comprehensive pan-cancer analyses of TLCD1, and the precise role of TLCD1 in cancer patient prognosis and immunological responses remains elusive. This study aims to provide a comprehensive visualization of the prognostic landscape associated with TLCD1 across a spectrum of cancers, while shedding light on the potential links between TLCD1 expression within the tumor microenvironment and immune infiltration characteristics. TLCD1 expression data were obtained from GTEx, TCGA, and HPA data repositories. Multiple databases including TIMER, HPA, TISIDB, cBioPortal, GEPIA2, STRING, KEGG, GO, and CancerSEA were used to investigate the expression pattern, diagnostic and prognostic significance, mutation status, functional analysis, and functional status of TLCD1. In addition, we evaluated the relationship between TLCD1 expression and immune infiltration, tumor mutational burden (TMB), microsatellite instability (MSI), and immune-related genes in pan-cancer. Furthermore, the association of TLCD1 with drug sensitivity was analyzed using the CellMiner database. We found that TLCD1 is generally highly expressed in pan-cancers and is significantly associated with the staging and prognosis of various cancers. Furthermore, our results also showed that TLCD1 was significantly associated with immune cell infiltration and immune regulatory factor expression. Using CellMiner database analysis, we then found a strong correlation between TLCD1 expression and sensitivity to anticancer drugs, indicating its potential as a therapeutic target. The most exciting finding is that high TLCD1 expression is associated with worse survival and prognosis in GBM and SKCM patients receiving anti-PD1 therapy. These findings highlight the potential of TLCD1 as a predictive biomarker for response to immunotherapy. TLCD1 plays a role in the regulation of immune infiltration and affects the prognosis of patients with various cancers. It serves as both a prognostic and immunologic biomarker in human cancer.
含TLC结构域1(TLCD1)蛋白是磷脂酰乙醇胺(PE)组成的关键调节因子,分布于包括线粒体质膜在内的多种细胞膜上。现有研究揭示了TLCD1对非酒精性脂肪性肝病发展的影响。然而,在对TLCD1的全面泛癌分析方面仍存在空白,TLCD1在癌症患者预后和免疫反应中的精确作用仍不清楚。本研究旨在全面展示与TLCD1相关的各种癌症的预后情况,同时阐明肿瘤微环境中TLCD1表达与免疫浸润特征之间的潜在联系。TLCD1表达数据来自GTEx、TCGA和HPA数据库。使用包括TIMER、HPA、TISIDB、cBioPortal、GEPIA2、STRING、KEGG、GO和CancerSEA在内的多个数据库来研究TLCD1的表达模式、诊断和预后意义、突变状态、功能分析以及功能状态。此外,我们评估了TLCD1表达与泛癌中免疫浸润、肿瘤突变负荷(TMB)、微卫星不稳定性(MSI)以及免疫相关基因之间的关系。此外,使用CellMiner数据库分析了TLCD1与药物敏感性的关联。我们发现TLCD1在泛癌中通常高表达,并且与各种癌症的分期和预后显著相关。此外,我们的结果还表明TLCD1与免疫细胞浸润和免疫调节因子表达显著相关。通过CellMiner数据库分析,我们随后发现TLCD1表达与抗癌药物敏感性之间存在很强的相关性,表明其作为治疗靶点的潜力。最令人兴奋的发现是,在接受抗PD1治疗的胶质母细胞瘤(GBM)和皮肤黑色素瘤(SKCM)患者中,高TLCD1表达与较差的生存和预后相关。这些发现突出了TLCD1作为免疫治疗反应预测生物标志物的潜力。TLCD1在免疫浸润调节中发挥作用,并影响各种癌症患者的预后。它在人类癌症中既是一种预后生物标志物,也是一种免疫生物标志物。