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黑茶系统发育的重新审视:线粒体基因组特征

Reexamination of phylogeny in dark tea: Characteristics of the mitochondrial genome.

作者信息

Zhiyuan Hu, Lin Chen, Yihan Wang, Meng Dong, Yanzi Li, Zhenggang Xu

机构信息

Hunan Provincial Key Lab of Dark Tea and Jin-hua, School of Materials and Chemical Engineering, Hunan City University, Yiyang 413000, Hunan, China.

College of Forestry, Northwest A & F University, Yangling 712100, Shaanxi, China.

出版信息

Open Life Sci. 2024 Mar 26;19(1):20220838. doi: 10.1515/biol-2022-0838. eCollection 2024.

Abstract

To enhance our understanding of , an important functional microorganism, the characteristics of its mitochondrial genome were analyzed and compared with related species. The mitochondrial genome of was determined to be 77,649 bp in length, with 15 protein-coding regions. Notably, its length surpassed that of the other species, primarily attributable to the intron length. Gene order exhibited significant variations, with greater conservation observed in the genus compared to . Phylogenetic tree analyses indicated that the genera and are closely related but monophyletic. Furthermore, the phylogenetic tree constructed based on protein-coding genes effectively distinguished all strains with high branching confidence. This approach provides a robust reflection of the evolutionary relationship between and its related species, offering potential for the development of molecular markers suitable for and .

摘要

为了增强我们对一种重要的功能微生物——[微生物名称]的理解,对其线粒体基因组的特征进行了分析,并与相关物种进行了比较。[微生物名称]的线粒体基因组长度确定为77,649 bp,有15个蛋白质编码区。值得注意的是,其长度超过了其他物种,主要归因于内含子长度。基因顺序表现出显著差异,与[比较物种名称]相比,[微生物名称所属属名]中观察到更高的保守性。系统发育树分析表明,[微生物名称所属属名]和[比较物种所属属名]密切相关但为单系。此外,基于蛋白质编码基因构建的系统发育树能够以高分支置信度有效区分所有菌株。这种方法有力地反映了[微生物名称]与其相关物种之间的进化关系,为开发适用于[微生物名称]和[比较物种名称]的分子标记提供了潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/12ea/10997147/aed65d37cb34/j_biol-2022-0838-fig001.jpg

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