Depatment of Anesthesiology and Perioperative Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Department of Structural Biology, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
ACS Chem Neurosci. 2024 May 15;15(10):2070-2079. doi: 10.1021/acschemneuro.4c00138. Epub 2024 May 1.
PDZ domains are modular domains that conventionally bind to C terminal or internal motifs of target proteins to control cellular functions through the regulation of protein complex assemblies. Almost all reported structures of PDZ-target protein complexes rely on fragments or peptides as target proteins. No intact target protein complexed with PDZ was structurally characterized. In this study, we used NMR spectroscopy and other biochemistry and biophysics tools to uncover insights into structural coupling between the PDZ domain of protein interacting with C-kinase 1 (PICK1) and α7 nicotinic acetylcholine receptors (α7 nAChR). Notably, the intracellular domains of both α7 nAChR and PICK1 PDZ exhibit a high degree of plasticity in their coupling. Specifically, the MA helix of α7 nAChR interacts with residues lining the canonical binding site of the PICK1 PDZ, while flexible loops also engage in protein-protein interactions. Both hydrophobic and electrostatic interactions mediate the coupling. Overall, the resulting structure of the α7 nAChR-PICK1 complex reveals an unconventional PDZ binding mode, significantly expanding the repertoire of functionally important PDZ interactions.
PDZ 结构域是模块化结构域,通常与靶蛋白的 C 末端或内部基序结合,通过调节蛋白质复合物组装来控制细胞功能。几乎所有报道的 PDZ-靶蛋白复合物的结构都依赖于片段或肽作为靶蛋白。没有与 PDZ 结合的完整靶蛋白复合物的结构特征。在这项研究中,我们使用 NMR 光谱学和其他生物化学和生物物理学工具来揭示蛋白相互作用激酶 1(PICK1)和α7 烟碱型乙酰胆碱受体(α7 nAChR)的 PDZ 结构域与靶蛋白之间结构偶联的见解。值得注意的是,α7 nAChR 和 PICK1 PDZ 的细胞内结构域在它们的偶联中表现出高度的可变性。具体而言,α7 nAChR 的 MA 螺旋与 PICK1 PDZ 的经典结合位点排列的残基相互作用,而柔性环也参与蛋白质-蛋白质相互作用。疏水相互作用和静电相互作用都介导了偶联。总体而言,α7 nAChR-PICK1 复合物的结构揭示了一种非传统的 PDZ 结合模式,显著扩展了具有重要功能的 PDZ 相互作用的范围。