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全面鉴定玉米 ZmE2F 转录因子和 ZmE2F6 在响应干旱胁迫中的积极作用。

Comprehensive identification of maize ZmE2F transcription factors and the positive role of ZmE2F6 in response to drought stress.

机构信息

Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.

College of Food and Biological Engineering, Chengdu University, Chengdu, 610106, China.

出版信息

BMC Genomics. 2024 May 13;25(1):465. doi: 10.1186/s12864-024-10369-0.

Abstract

BACKGROUND

The early 2 factor (E2F) family is characterized as a kind of transcription factor that plays an important role in cell division, DNA damage repair, and cell size regulation. However, its stress response has not been well revealed.

RESULTS

In this study, ZmE2F members were comprehensively identified in the maize genome, and 21 ZmE2F genes were identified, including eight E2F subclade members, seven DEL subfamily genes, and six DP genes. All ZmE2F proteins possessed the DNA-binding domain (DBD) characterized by conserved motif 1 with the RRIYD sequence. The ZmE2F genes were unevenly distributed on eight maize chromosomes, showed diversity in gene structure, expanded by gene duplication, and contained abundant stress-responsive elements in their promoter regions. Subsequently, the ZmE2F6 gene was cloned and functionally verified in drought response. The results showed that the ZmE2F6 protein interacted with ZmPP2C26, localized in the nucleus, and responded to drought treatment. The overexpression of ZmE2F6 enhanced drought tolerance in transgenic Arabidopsis with longer root length, higher survival rate, and biomass by upregulating stress-related gene transcription.

CONCLUSIONS

This study provides novel insights into a greater understanding and functional study of the E2F family in the stress response.

摘要

背景

早期 2 因子(E2F)家族是一种转录因子,在细胞分裂、DNA 损伤修复和细胞大小调节中发挥重要作用。然而,其应激反应尚未得到充分揭示。

结果

本研究在玉米基因组中全面鉴定了 ZmE2F 成员,共鉴定出 21 个 ZmE2F 基因,包括 8 个 E2F 亚家族成员、7 个 DEL 亚家族基因和 6 个 DP 基因。所有 ZmE2F 蛋白都具有 DNA 结合域(DBD),特征是保守基序 1 中的 RRIYD 序列。ZmE2F 基因不均匀分布在玉米的 8 条染色体上,在基因结构上表现出多样性,通过基因复制扩展,并在启动子区域含有丰富的应激响应元件。随后,克隆并验证了干旱响应中的 ZmE2F6 基因。结果表明,ZmE2F6 蛋白与 ZmPP2C26 相互作用,定位于细胞核中,并对干旱处理产生响应。过表达 ZmE2F6 通过上调应激相关基因的转录,增强了转基因拟南芥的耐旱性,表现为根长更长、存活率更高和生物量更高。

结论

本研究为进一步了解 E2F 家族在应激反应中的作用提供了新的见解。

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