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探索下咽癌和 EGFR 突变型肺腺癌的基因调控互作网络,并预测治疗分子。

Exploring gene regulatory interaction networks and predicting therapeutic molecules for hypopharyngeal cancer and EGFR-mutated lung adenocarcinoma.

机构信息

Department of Computer Science and Engineering, Jagannath University, Dhaka, Bangladesh.

School of Information Technology, Deakin University, Geelong, Australia.

出版信息

FEBS Open Bio. 2024 Jul;14(7):1166-1191. doi: 10.1002/2211-5463.13807. Epub 2024 May 23.

Abstract

Hypopharyngeal cancer is a disease that is associated with EGFR-mutated lung adenocarcinoma. Here we utilized a bioinformatics approach to identify genetic commonalities between these two diseases. To this end, we examined microarray datasets from GEO (Gene Expression Omnibus) to identify differentially expressed genes, common genes, and hub genes between the selected two diseases. Our analyses identified potential therapeutic molecules for the selected diseases based on 10 hub genes with the highest interactions according to the degree topology method and the maximum clique centrality (MCC). These therapeutic molecules may have the potential for simultaneous treatment of these diseases.

摘要

下咽癌是一种与 EGFR 突变型肺腺癌相关的疾病。在这里,我们利用生物信息学方法来确定这两种疾病之间的遗传共性。为此,我们检查了 GEO(基因表达综合数据库)中的微阵列数据集,以确定选定的两种疾病之间差异表达的基因、共同基因和枢纽基因。根据度拓扑方法和最大团中心性 (MCC),我们对 10 个具有最高相互作用的枢纽基因进行分析,确定了针对所选疾病的潜在治疗分子。这些治疗分子可能具有同时治疗这些疾病的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/019f/11216941/f2cc3e538508/FEB4-14-1166-g001.jpg

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