Li Dak Sum Yip Yio Chin Kenneth Li Marine Biopharmaceutical Research Center, Ningbo University, Ningbo, 315800, PR China.
Ningbo Institute of Marine Medicine, Peking University, Ningbo, Zhejiang 315800, PR China.
Int J Syst Evol Microbiol. 2024 May;74(5). doi: 10.1099/ijsem.0.006374.
A Gram-negative, rod-shaped, non-motile and strictly aerobic strain, designated NBU2979, was isolated from a coastal mudflat located on Meishan Island in the East China Sea. Strain NBU2979 grew optimally at 32 °C, with 2.0 % NaCl (w/v) and at pH 7.0-7.5. The predominant fatty acid (>10 %) was iso-C. The major polar lipids included phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, phosphatidyldimethylethanolamine, phosphatidylcholine, an unidentified glycolipid, two unidentified aminophospholipids, an unidentified phospholipid and an unidentified lipid. The only respiratory quinone was ubiquinone-8. Comparative analysis of 16S rRNA gene sequences showed that strain NBU2979 exhibited highest similarity to F2 (98.0 %), S1101 (97.5 %), KMM 3900 (96.6 %), 3539 (95.5 %), sw153 (95.2 %) and S6413 (94.9 %). Phylogenetic analyses indicated that strain NBU2979 clustered with the genus and was closely related to strain F2. The average nucleotide identity and digital DNA-DNA hybridization values between strain NBU2979 and related species of genus were well below the threshold limit for prokaryotic species delineation. The DNA G+C content of strain NBU2979 was 51.6 mol%. Based on its phenotypic, chemotaxonomic and genotypic data, strain NBU2979 (=KCTC 82911=MCCC 1K06402) is considered to be a representative of a novel species in the genus , for which the name sp. nov. is proposed.
一株革兰氏阴性、杆状、非运动和严格需氧的菌株,被命名为 NBU2979,是从中国东海梅山岛的一个沿海泥滩中分离得到的。菌株 NBU2979 在 32°C、2.0%(w/v)NaCl 和 pH7.0-7.5 的条件下生长最佳。主要脂肪酸(>10%)为 iso-C。主要极性脂包括磷脂酰甘油、磷脂酰乙醇胺、双磷脂酰甘油、磷脂酰二甲乙醇胺、磷脂酰胆碱、一种未鉴定的糖脂、两种未鉴定的氨基磷脂、一种未鉴定的磷脂和一种未鉴定的脂类。唯一的呼吸醌是泛醌-8。16S rRNA 基因序列的比较分析表明,菌株 NBU2979与 F2(98.0%)、S1101(97.5%)、KMM 3900(96.6%)、3539(95.5%)、sw153(95.2%)和 S6413(94.9%)最为相似。系统发育分析表明,菌株 NBU2979与属内的其他菌株聚类,并与菌株 F2 关系最为密切。菌株 NBU2979 与属内相关种的平均核苷酸同一性和数字 DNA-DNA 杂交值均远低于原核生物种划分的阈值。菌株 NBU2979 的 DNA G+C 含量为 51.6mol%。基于其表型、化学分类和基因型数据,菌株 NBU2979(=KCTC 82911=MCCC 1K06402)被认为是属内一个新种的代表,因此建议将其命名为 sp. nov.。