Suppr超能文献

纳米构建体:一个用于研究椭球形纳米颗粒晶体生长、稳定性以及计算原子描述符的网络应用程序构建器。

NanoConstruct: A web application builder of ellipsoidal nanoparticles for the investigation of their crystal growth, stability, and the calculation of atomistic descriptors.

作者信息

Kolokathis Panagiotis D, Zouraris Dimitrios, Voyiatzis Evangelos, Sidiropoulos Nikolaos K, Tsoumanis Andreas, Melagraki Georgia, Tämm Kaido, Lynch Iseult, Afantitis Antreas

机构信息

NovaMechanics MIKE, Piraeus 18545, Greece.

Entelos Institute, Larnaca 6059, Cyprus.

出版信息

Comput Struct Biotechnol J. 2024 May 25;25:81-90. doi: 10.1016/j.csbj.2024.05.039. eCollection 2024 Dec.

Abstract

NanoConstruct is a state-of-the-art computational tool that enables a) the digital construction of ellipsoidal neutral energy minimized nanoparticles (NPs) in vacuum through its graphical user-friendly interface, and b) the calculation of NPs atomistic descriptors. It allows the user to select NP's shape and size by inserting its ellipsoidal axes and rotation angle while the NP material is selected by uploading its Crystallography Information File (CIF). To investigate the stability of materials not yet synthesised, NanoConstruct allows the substitution of the chemical elements of an already synthesized material with chemical elements that belong into the same group and neighbouring rows of the periodic table. The process is divided into three stages: 1) digital construction of the unit cell, 2) digital construction of NP using geometry rules and keeping its stoichiometry and 3) energy minimization of the geometrically constructed NP and calculation of its atomistic descriptors. In this study, NanoConstruct was applied for the investigation of the crystal growth of Zirconia (ZrO) NPs when in the rutile form. The most stable configuration and the crystal growth route were identified, showing a preferential direction for the crystal growth of ZrO in its rutile form. NanoConstruct is freely available through the Enalos Cloud Platform (https://enaloscloud.novamechanics.com/riskgone/nanoconstruct/).

摘要

NanoConstruct是一种先进的计算工具,它能够:a)通过其图形用户友好界面在真空中以数字方式构建椭圆形中性能量最小化的纳米颗粒(NP),以及b)计算NP的原子描述符。它允许用户通过插入椭圆轴和旋转角度来选择NP的形状和尺寸,同时通过上传其晶体学信息文件(CIF)来选择NP材料。为了研究尚未合成的材料的稳定性,NanoConstruct允许用属于元素周期表同一族和相邻行的化学元素替换已合成材料的化学元素。该过程分为三个阶段:1)晶胞的数字构建,2)使用几何规则并保持其化学计量比的NP的数字构建,以及3)对几何构建的NP进行能量最小化并计算其原子描述符。在本研究中,NanoConstruct被用于研究金红石型氧化锆(ZrO)纳米颗粒的晶体生长。确定了最稳定的构型和晶体生长途径,显示了金红石型ZrO晶体生长的优先方向。可通过Enalos云平台(https://enaloscloud.novamechanics.com/riskgone/nanoconstruct/)免费获取NanoConstruct。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验