College of Horticulture, Gansu Agricultural University, Lanzhou 730070, China.
Int J Mol Sci. 2024 May 30;25(11):5984. doi: 10.3390/ijms25115984.
SNARE proteins (soluble N-ethylmaleimide-sensitive factor attachment protein receptors) play a key role in mediating a variety of plant biological processes. Currently, the function of the SNARE gene family in phytohormonal and abiotic stress treatments in grapevine is currently unknown, making it worthwhile to characterize and analyze the function and expression of this family in grapevine. In the present study, 52 genes were identified and predominantly distributed on 18 chromosomes. Secondary structures showed that the genes family irregular random coils and α-helices. The promoter regions of the genes were enriched for light-, abiotic-stress-, and hormone-responsive elements. Intraspecific collinearity analysis identified 10 pairs collinear genes within the family and unveiled a greater number of collinear genes between grapevine and apple, as well as , but less associations with . Quantitative real-time PCR (qRT-PCR) analyses showed that the genes have response to treatments with ABA, NaCl, PEG, and 4 °C. Notably, , , , and showed up-regulation in response to ABA treatment. , , , , , , and exhibited significant up-regulation when exposed to NaCl treatment. The PEG treatment led to significant down-regulation of , , , , , and gene expression. The expression levels of , and were significantly enhanced after exposure to 4 °C treatment. Furthermore, subcellular localization assays certified that , , and were specifically localized at the cell membrane. Overall, this study showed the critical role of the genes family in the abiotic stress response of grapevines, thereby providing novel candidate genes such as , , and for further exploration in grapevine stress tolerance research.
SNARE 蛋白(可溶性 N-乙基马来酰亚胺敏感因子附着蛋白受体)在介导多种植物生物学过程中发挥着关键作用。目前,SNARE 基因家族在葡萄激素和非生物胁迫处理中的功能尚不清楚,因此对该家族在葡萄中的功能和表达进行特征分析是很有价值的。在本研究中,鉴定出 52 个基因,主要分布在 18 条染色体上。二级结构显示该家族基因不规则的随机卷曲和α-螺旋。基因启动子区域富含光、非生物胁迫和激素响应元件。种内共线性分析鉴定出 10 对共线性基因,揭示了葡萄和苹果之间存在更多的共线性基因,而与 的共线性基因较少。定量实时 PCR(qRT-PCR)分析表明,这些基因对 ABA、NaCl、PEG 和 4°C 的处理有反应。值得注意的是,、、、和在 ABA 处理下表现出上调。、、、、、、和在 NaCl 处理下表现出显著上调。PEG 处理导致 、、、、、和基因表达显著下调。、和在 4°C 处理后表达水平显著增强。此外,亚细胞定位试验证明 、和在细胞膜上特异性定位。总的来说,本研究表明 SNARE 基因家族在葡萄的非生物胁迫响应中起着关键作用,为进一步探索葡萄的胁迫耐受研究提供了新的候选基因,如、和。