Oishi-Tomiyasu Ryoko
Institute of Mathematics for Industry, Kyushu University, Fukuoka, Japan.
Acta Crystallogr A Found Adv. 2024 Jul 1;80(Pt 4):339-350. doi: 10.1107/S2053273324004418. Epub 2024 Jun 25.
In ab initio indexing, for a given diffraction/scattering pattern, the unit-cell parameters and the Miller indices assigned to reflections in the pattern are determined simultaneously. `Ab initio' means a process performed without any good prior information on the crystal lattice. Newly developed ab initio indexing software is frequently reported in crystallography. However, it is not widely recognized that use of a Bravais lattice determination method, which is tolerant of experimental errors, can simplify indexing algorithms and increase their success rates. One of the goals of this article is to collect information on the lattice-basis reduction theory and its applications. The main result is a Bravais lattice determination algorithm for 2D lattices, along with a mathematical proof that it works even for parameters containing large observational errors. It uses two lattice-basis reduction methods that seem to be optimal for different symmetries, similarly to the algorithm for 3D lattices implemented in the CONOGRAPH software. In indexing, a method for error-stable unit-cell identification is also required to exclude duplicate solutions. Several methods are introduced to measure the difference in unit cells known in crystallography and mathematics.
在从头算指标化中,对于给定的衍射/散射图案,晶胞参数和分配给图案中反射的密勒指数是同时确定的。“从头算”是指在没有关于晶格的任何良好先验信息的情况下进行的过程。晶体学中经常报道新开发的从头算指标化软件。然而,尚未广泛认识到使用容忍实验误差的布拉菲晶格确定方法可以简化指标化算法并提高其成功率。本文的目标之一是收集有关晶格基约化理论及其应用的信息。主要结果是一种二维晶格的布拉菲晶格确定算法,以及一个数学证明,即即使对于包含大观测误差的参数,该算法也有效。它使用两种似乎对不同对称性最优的晶格基约化方法,类似于CONOGRAPH软件中实现的三维晶格算法。在指标化中,还需要一种误差稳定的晶胞识别方法来排除重复解。介绍了几种测量晶体学和数学中已知的晶胞差异的方法。