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整合宏基因组和代谢组学分析揭示颅内动脉瘤具有独特的、与阶段相关的肠道微生物衍生代谢物。

Integrated metagenomic and metabolomic analysis reveals distinctive stage-specific gut-microbiome-derived metabolites in intracranial aneurysms.

机构信息

Neurosurgery Centre, Department of Cerebrovascular Surgery, Engineering Technology Research Centre of Education Ministry of China on Diagnosis and Treatment of Cerebrovascular Disease, The National Key Clinical Specialty, Guangdong Provincial Key Laboratory on Brain Function Repair and Regeneration, The Neurosurgery Institute of Guangdong Province, Zhujiang Hospital, Southern Medical University, Guangzhou, Guangdong, China

Microbiome Medicine Centre, Clinical Biobank Centre, Guangdong Provincial Clinical Research Centre for Laboratory Medicine, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, Guangdong, China.

出版信息

Gut. 2024 Sep 9;73(10):1662-1674. doi: 10.1136/gutjnl-2024-332245.

Abstract

OBJECTIVE

Our study aimed to explore the influence of gut microbiota and their metabolites on intracranial aneurysms (IA) progression and pinpoint-related metabolic biomarkers derived from the gut microbiome.

DESIGN

We recruited 358 patients with unruptured IA (UIA) and 161 with ruptured IA (RIA) from two distinct geographical regions for conducting an integrated analysis of plasma metabolomics and faecal metagenomics. Machine learning algorithms were employed to develop a classifier model, subsequently validated in an independent cohort. Mouse models of IA were established to verify the potential role of the specific metabolite identified.

RESULTS

Distinct shifts in taxonomic and functional profiles of gut microbiota and their related metabolites were observed in different IA stages. Notably, tryptophan metabolites, particularly indoxyl sulfate (IS), were significantly higher in plasma of RIA. Meanwhile, upregulated tryptophanase expression and indole-producing microbiota were observed in gut microbiome of RIA. A model harnessing gut-microbiome-derived tryptophan metabolites demonstrated remarkable efficacy in distinguishing RIA from UIA patients in the validation cohort (AUC=0.97). Gut microbiota depletion by antibiotics decreased plasma IS concentration, reduced IA formation and rupture in mice, and downregulated matrix metalloproteinase-9 expression in aneurysmal walls with elastin degradation reduction. Supplement of IS reversed the effect of gut microbiota depletion.

CONCLUSION

Our investigation highlights the potential of gut-microbiome-derived tryptophan metabolites as biomarkers for distinguishing RIA from UIA patients. The findings suggest a novel pathogenic role for gut-microbiome-derived IS in elastin degradation in the IA wall leading to the rupture of IA.

摘要

目的

本研究旨在探讨肠道微生物群及其代谢产物对颅内动脉瘤(IA)进展的影响,并确定源自肠道微生物组的相关代谢生物标志物。

设计

我们从两个不同的地理区域招募了 358 名未破裂颅内动脉瘤(UIA)患者和 161 名破裂颅内动脉瘤(RIA)患者,对其进行血浆代谢组学和粪便宏基因组学的综合分析。我们采用机器学习算法构建分类器模型,并在独立队列中进行验证。建立 IA 小鼠模型以验证鉴定出的特定代谢物的潜在作用。

结果

在不同的 IA 阶段,肠道微生物群及其相关代谢物的分类和功能谱发生了明显变化。值得注意的是,色氨酸代谢物,特别是吲哚硫酸酯(IS),在 RIA 患者的血浆中明显升高。同时,在 RIA 的肠道微生物组中观察到色氨酸酶表达上调和吲哚产生菌增多。利用肠道微生物组衍生的色氨酸代谢物构建的模型在验证队列中对 RIA 与 UIA 患者的区分具有显著疗效(AUC=0.97)。抗生素耗尽肠道微生物群可降低血浆 IS 浓度,减少小鼠的 IA 形成和破裂,并降低动脉瘤壁中基质金属蛋白酶-9 的表达,同时减少弹性蛋白降解。补充 IS 可逆转肠道微生物群耗竭的作用。

结论

本研究强调了肠道微生物组衍生的色氨酸代谢物作为区分 RIA 与 UIA 患者的生物标志物的潜力。研究结果表明,肠道微生物组衍生的 IS 通过弹性蛋白降解在 IA 壁中发挥新的致病作用,导致 IA 破裂。

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