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连续 X 射线液相层析法:探索生物分子结构动力学的多维分析框架,只需微克级样本量。

Serial X-ray liquidography: multi-dimensional assay framework for exploring biomolecular structural dynamics with microgram quantities.

机构信息

Center for Advanced Reactions Dynamics (CARD), Institute for Basic Science (IBS), Daejeon, 34141, Republic of Korea.

Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, Republic of Korea.

出版信息

Nat Commun. 2024 Jul 26;15(1):6287. doi: 10.1038/s41467-024-50696-0.

Abstract

Understanding protein structure and kinetics under physiological conditions is crucial for elucidating complex biological processes. While time-resolved (TR) techniques have advanced to track molecular actions, their practical application in biological reactions is often confined to reversible photoreactions within limited experimental parameters due to inefficient sample utilization and inflexibility of experimental setups. Here, we introduce serial X-ray liquidography (SXL), a technique that combines time-resolved X-ray liquidography with a fixed target of serially arranged microchambers. SXL breaks through the previously mentioned barriers, enabling microgram-scale TR studies of both irreversible and reversible reactions of even a non-photoactive protein. We demonstrate its versatility in studying a wide range of biological reactions, highlighting its potential as a flexible and multi-dimensional assay framework for kinetic and structural characterization. Leveraging X-ray free-electron lasers and micro-focused X-ray pulses promises further enhancements in both temporal resolution and minimizing sample quantity. SXL offers unprecedented insights into the structural and kinetic landscapes of molecular actions, paving the way for a deeper understanding of complex biological processes.

摘要

在生理条件下理解蛋白质结构和动力学对于阐明复杂的生物过程至关重要。虽然时间分辨 (TR) 技术已经发展到可以跟踪分子的作用,但由于样品利用率低和实验设置缺乏灵活性,它们在生物反应中的实际应用通常仅限于有限实验参数内的可逆光反应。在这里,我们介绍了连续 X 射线液体断层摄影术 (SXL),这是一种将时间分辨 X 射线液体断层摄影术与连续排列的微室固定靶相结合的技术。SXL 突破了上述障碍,使得微克级的 TR 研究能够对非光活性蛋白质的不可逆和可逆反应进行研究。我们展示了它在研究广泛的生物反应中的多功能性,突出了它作为一种灵活的多维分析框架在动力学和结构表征方面的潜力。利用 X 射线自由电子激光器和微聚焦 X 射线脉冲有望进一步提高时间分辨率和最小化样品数量。SXL 为分子作用的结构和动力学景观提供了前所未有的见解,为深入理解复杂的生物过程铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22c8/11282289/9a37916292d9/41467_2024_50696_Fig1_HTML.jpg

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