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利用支气管肺泡灌洗术(BALF)外泌体DNA甲基化谱鉴别肺癌与良性肺部疾病

Discrimination of Lung Cancer and Benign Lung Diseases Using BALF Exosome DNA Methylation Profile.

作者信息

Batochir Chinbayar, Kim In Ae, Jo Eun Ji, Kim Eun-Bi, Kim Hee Joung, Hur Jae Young, Kim Do Won, Park Hee Kyung, Lee Kye Young

机构信息

Seasun Biomaterials, Inc., Daejeon 34015, Republic of Korea.

Precision Medicine Lung Cancer Center, Konkuk University Medical Center, Seoul 05030, Republic of Korea.

出版信息

Cancers (Basel). 2024 Aug 5;16(15):2765. doi: 10.3390/cancers16152765.

Abstract

Benign lung diseases are common and often do not require specific treatment, but they pose challenges in the distinguishing of them from lung cancer during low-dose computed tomography (LDCT). This study presents a comprehensive methylation analysis using real-time PCR for minimally invasive diagnoses of lung cancer via employing BALF exosome DNA. A panel of seven epigenetic biomarkers was identified, exhibiting specific methylation patterns in lung cancer BALF exosome DNA. This panel achieved an area under the curve (AUC) of 0.97, with sensitivity and specificity rates of 88.24% and 97.14%, respectively. Each biomarker showed significantly higher mean methylation levels (MMLs) in both non-small cell lung cancer (NSCLC) and small cell lung cancer (SCLC) compared to non-cancer groups, with fold changes from 1.7 to 13.36. The MMLs of the biomarkers were found to be moderately elevated with increasing patient age and smoking history, regardless of sex. A strong correlation was found between the MMLs and NSCLC stage progression, with detection sensitivities of 79% for early stages and 92% for advanced stages. In the validation cohort, the model demonstrated an AUC of 0.95, with 94% sensitivity and specificity. Sensitivity for early-stage NSCLC detection improved from 88.00% to 92.00% when smoking history was included as an additional risk factor.

摘要

良性肺部疾病很常见,通常不需要特殊治疗,但在低剂量计算机断层扫描(LDCT)过程中,将它们与肺癌区分开来存在挑战。本研究通过使用支气管肺泡灌洗(BALF)外泌体DNA进行实时PCR,对肺癌进行微创诊断,进行了全面的甲基化分析。确定了一组七个表观遗传生物标志物,它们在肺癌BALF外泌体DNA中表现出特定的甲基化模式。该组生物标志物的曲线下面积(AUC)为0.97,敏感性和特异性分别为88.24%和97.14%。与非癌症组相比,每个生物标志物在非小细胞肺癌(NSCLC)和小细胞肺癌(SCLC)中的平均甲基化水平(MML)均显著更高,倍数变化范围为1.7至13.36。发现生物标志物的MML随着患者年龄和吸烟史的增加而适度升高,与性别无关。发现MML与NSCLC分期进展之间存在强相关性,早期检测敏感性为79%,晚期为92%。在验证队列中,该模型的AUC为0.95,敏感性和特异性为94%。当将吸烟史作为额外的风险因素纳入时,早期NSCLC检测的敏感性从88.00%提高到92.00%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e75/11311347/df099149da16/cancers-16-02765-g001.jpg

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