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线粒体相关的 HSDL2 通过调节星形胶质细胞的脂质代谢在颞叶癫痫中是一种潜在的生物标志物。

Mitochondria-related HSDL2 is a potential biomarker in temporal lobe epilepsy by modulating astrocytic lipid metabolism.

机构信息

Qilu Hospital of Shandong University, Cheeloo College of Medicine, Shandong University, Jinan, Shandong, China.

Department of Neurosurgery, Qilu Hospital of Shandong University, Cheeloo College of Medicine and Institute of Brain and Brain-Inspired Science, Shandong University, Jinan, Shandong, China.

出版信息

Neurotherapeutics. 2024 Oct;21(6):e00447. doi: 10.1016/j.neurot.2024.e00447. Epub 2024 Sep 7.

Abstract

Temporal lobe epilepsy (TLE) is the most prevalent type of focal epilepsy in adults. While comprehensive bioinformatics analyses have facilitated the identification of novel biomarkers in animal models, similar efforts are limited for TLE patients. In the current study, a comprehensive analysis using human transcriptomics datasets GSE205661, GSE190451, and GSE186334 was conducted to reveal differentially expressed genes related to mitochondria (Mito-DEGs). Protein-protein interaction (PPI) network and Least Absolute Shrinkage and Selection Operator (LASSO) regression analyses were performed to identify hub genes. Additional GSE127871 and GSE255223 were utilized to establish the association with hippocampal sclerosis (HS) and seizure frequency, respectively. Single-cell RNA analysis, functional investigation, and clinical verification were conducted. Herein, we reported that the Mito-DEGs in human TLE were significantly enriched in metabolic processes. Through PPI and LASSO analysis, HSDL2 was identified as the hub gene, of which diagnostic potential was further confirmed using independent datasets, animal models, and clinical validation. Subsequent single-cell and functional analyses revealed that HSDL2 expression was enriched and upregulated in response to excessive lipid accumulation in astrocytes. Additionally, the diagnostic efficiency of blood HSDL2 was verified in Qilu cohort. Together, our findings highlight the translational potential of HSDL2 as a biomarker and provide a novel therapeutic perspective for human TLE.

摘要

颞叶癫痫(TLE)是成人中最常见的局灶性癫痫类型。虽然全面的生物信息学分析有助于在动物模型中识别新的生物标志物,但针对 TLE 患者的类似努力却有限。在当前研究中,我们对人类转录组数据集 GSE205661、GSE190451 和 GSE186334 进行了全面分析,以揭示与线粒体(Mito-DEGs)相关的差异表达基因。通过蛋白质-蛋白质相互作用(PPI)网络和最小绝对收缩和选择算子(LASSO)回归分析来鉴定关键基因。还使用了另外两个数据集 GSE127871 和 GSE255223 分别建立与海马硬化(HS)和癫痫发作频率的关联。进行了单细胞 RNA 分析、功能研究和临床验证。在此,我们报告了人类 TLE 中的 Mito-DEGs 在代谢过程中显著富集。通过 PPI 和 LASSO 分析,鉴定出 HSDL2 为关键基因,其诊断潜力在使用独立数据集、动物模型和临床验证中得到了进一步证实。随后的单细胞和功能分析表明,HSDL2 在星形胶质细胞中过度脂质积累时的表达增加。此外,在齐鲁队列中验证了血液 HSDL2 的诊断效率。总之,我们的研究结果突出了 HSDL2 作为生物标志物的转化潜力,并为人类 TLE 提供了新的治疗视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0e1/11585875/6fa9a27e7674/ga1.jpg

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