Academy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.
Laboratory of Research and Utilization of Germplasm Resources in Qinghai-Tibet Plateau, Qinghai University, Xining 810016, China.
Int J Mol Sci. 2024 Aug 27;25(17):9261. doi: 10.3390/ijms25179261.
Low temperature is a significant abiotic stress factor that not only impacts plant growth, development, yield, and quality but also constrains the geographical distribution of numerous wild plants. Kohlrabi ( L. var. L.) belongs to the Brassicaceae family and has a short growing period. In this study, a total of 196,642 unigenes were obtained from kohlrabi seedlings at low temperatures; of these, 52,836 unigenes were identified as differentially expressed genes. Transcription factor family members , , , etc. that had a high correlation with biochemical indicators related to low temperature were identified. A total of nineteen genes (named -) were obtained, and these genes were distributed unevenly across seven chromosomes. Nineteen genes searched four conserved motifs and were divided into three groups. The relative expression level analysis of 19 genes of kohlrabi showed obvious specificity in different tissues. This study lays a foundation and provides new insight to explain the low-temperature resistance mechanism and response pathways of kohlrabi. It also provides a theoretical basis for the functional analysis of 19 transcription factor gene family members.
低温是一种重要的非生物胁迫因素,不仅影响植物的生长、发育、产量和品质,还限制了许多野生植物的地理分布。大头菜( L. var. L.)属于十字花科,生长周期短。本研究从低温下的大头菜幼苗中获得了总共 196642 条非编码 RNA 序列;其中,52836 条非编码 RNA 序列被鉴定为差异表达基因。鉴定出与与低温相关的生化指标密切相关的转录因子家族成员 、 、 等。共获得十九个 基因(命名为-),这些基因不均匀分布在 7 条染色体上。19 个基因搜索到四个保守基序,并分为三组。大头菜 19 个基因的相对表达水平分析在不同组织中表现出明显的特异性。本研究为解释大头菜的抗低温机制和响应途径奠定了基础并提供了新的见解,也为 19 个转录因子基因家族成员的功能分析提供了理论依据。