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使用长程PCR对II型黏多糖贮积症倒位变异进行快速基因分型:一例报告

Rapid genotyping of inversion variants in Mucopolysaccharidosis type II using long-range PCR: A case report.

作者信息

Hattori Yusuke, Kido Jun, Sugawara Keishin, Sawada Takaaki, Matsumoto Shirou, Nakamura Kimitoshi

机构信息

Department of Pediatrics, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.

Department of Pediatrics, Kumamoto University Hospital, Kumamoto, Japan.

出版信息

Mol Genet Metab Rep. 2024 Aug 31;41:101139. doi: 10.1016/j.ymgmr.2024.101139. eCollection 2024 Dec.

Abstract

Mucopolysaccharidosis II (MPS II) is a lysosomal storage disease caused by a deficiency in iduronate-2-sulfatase (IDS), leading to the accumulation of dermatan sulfate and heparan sulfate in lysosomes. Traditionally, genotyping of the gene has been conducted through exome sequencing, which fails to detect inversion variants. Consequently, when no pathogenic variants are detected in exons, additional PCR-based analysis is required. Herein, we introduce a rapid genotyping technique method using long-range PCR for MPS II patients. We successfully identified an inversion variant and confirmed the sequences of the inversion regions. We also confirmed that the pathogenic variant in the patient originated . These findings suggest that long-range PCR genotyping can identify inversion variants more rapidly compared to the previous PCR-based methods, making it a valuable tool for newborn screening (NBS) and genetic diagnosis.

摘要

黏多糖贮积症II型(MPS II)是一种溶酶体贮积病,由艾杜糖-2-硫酸酯酶(IDS)缺乏引起,导致硫酸皮肤素和硫酸乙酰肝素在溶酶体中蓄积。传统上,该基因的基因分型是通过外显子组测序进行的,这种方法无法检测到倒位变异。因此,当在外显子中未检测到致病变异时,需要进行额外的基于PCR的分析。在此,我们介绍一种使用长程PCR对MPS II患者进行快速基因分型的技术方法。我们成功鉴定出一个倒位变异,并确认了倒位区域的序列。我们还确认了患者中的致病变异起源。这些发现表明,与之前基于PCR的方法相比,长程PCR基因分型能够更快速地鉴定倒位变异,使其成为新生儿筛查(NBS)和基因诊断的一个有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b77/11402328/e356999b6fce/gr1.jpg

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