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墨西哥分离株中的 Myroides 种、致病谱和临床微生物学观察。

Myroides species, pathogenic spectrum and clinical microbiology sight in Mexican isolates.

机构信息

Infectious Diseases Division, Clinical Microbiology Laboratory, Instituto Nacional de Rehabilitación Luis Guillermo Ibarra Ibarra, Mexico City, Mexico.

Programa "Investigadoras e Investigadores por México", Consejo Nacional de Humanidades, Ciencias y Tecnologías (CONAHCYT), Mexico City, Mexico.

出版信息

PLoS One. 2024 Nov 4;19(11):e0310262. doi: 10.1371/journal.pone.0310262. eCollection 2024.

Abstract

INTRODUCTION

Myroides is a bacterial genus of opportunistic bacteria responsible for diverse infections including in the skin and soft tissues, urinary tract, cardiovascular system, and bacteremia, although the incidence of its reported infections is low, it is increasing, likely due the use of better bacterial identification methods, but also perhaps due an increase in its prevalence. In addition, their pathogenic role is limited in terms of reporting their microbial physiology, so the present work provides information in this regard in addition to the information that is available in the international literature.

OBJECTIVE

To describe the microbiological and genetic characteristics of seven different Myroides spp. clinical strains and comment on their phylum, pathogenic and resistance characteristics.

METHODS

Seven Myroides spp., strains associated with infections were included from 1/January/2012 to 1/January/20 and identified by miniaturized biochemistry and MALDI-ToF. Susceptibility tests were performed according to CLSI recommendations by broth microdilution. Whole genome sequencing was performed for each strain and bioinformatics analysis were performed.

RESULTS

Strains were identified at genus level by two methodologies. Our results revealed that likely four strains belong to the species Myroides odoratimimus, while the other two may be undescribed ones. Remarkably, all isolates harbored several genes encoding antibiotic resistance determinants for ß-lactams, aminoglycosides and glycopeptides and in concordance, presented high levels of resistance, against these antibiotics (AK and GN both 100%, ATM, CAZ and FEP 100%, e.g.); moreover, the presences of carbapenemases were evidenced by meropenem (mCIM) and imipenem (CARBA NP) degrading activity in six isolates and two strains possessed plasmids harboring mainly ribosomal RNA genes, tRNAs and genes encoding proteins with unknown functions.

CONCLUSIONS

Our study increases the knowledge about the biology of this understudied genus and highlights the potential of Myroides to emerge as a broader cause of recalcitrant opportunistic infections.

摘要

简介

Myroides 是一种机会致病菌属,可引起多种感染,包括皮肤和软组织、尿路、心血管系统和菌血症,尽管其报告感染的发生率较低,但呈上升趋势,这可能是由于更好的细菌鉴定方法的使用,但也可能是由于其流行率的增加。此外,由于其微生物生理学的报道较少,其致病作用有限,因此本工作除了提供国际文献中可用的信息外,还提供了这方面的信息。

目的

描述七种不同的 Myroides spp. 临床株的微生物学和遗传学特征,并评论其门、致病性和耐药性特征。

方法

从 2012 年 1 月 1 日至 2020 年 1 月 1 日,纳入与感染相关的七种 Myroides spp. 菌株,并通过微型生化和 MALDI-ToF 进行鉴定。根据 CLSI 建议通过肉汤微量稀释法进行药敏试验。对每种菌株进行全基因组测序,并进行生物信息学分析。

结果

通过两种方法在属水平上鉴定了菌株。我们的结果表明,可能有四个菌株属于 Myroides odoratimimus 种,而另外两个可能是未描述的菌株。值得注意的是,所有分离株都携带多个编码抗生素耐药决定因素的基因,包括β-内酰胺类、氨基糖苷类和糖肽类抗生素,并且与这些抗生素的高水平耐药性一致(AK 和 GN 均为 100%,ATM、CAZ 和 FEP 均为 100%,例如);此外,在六种分离株中,通过美罗培南(mCIM)和亚胺培南(CARBA NP)降解活性证实了碳青霉烯酶的存在,并且两种菌株都携带质粒,主要包含核糖体 RNA 基因、tRNA 和编码具有未知功能的蛋白质的基因。

结论

我们的研究增加了对这个研究较少的属的生物学的认识,并强调了 Myroides 作为更广泛的机会性感染的原因的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33f7/11534234/8a7e0d5d0637/pone.0310262.g001.jpg

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