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高度相似的氯代烷烃还原脱卤酶的对比动力学

Contrasting Kinetics of Highly Similar Chloroalkane Reductive Dehalogenases.

作者信息

Picott Katherine J, Edwards Elizabeth A

机构信息

Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario M5S 3E5, Canada.

出版信息

Environ Sci Technol. 2024 Dec 17;58(50):22235-22244. doi: 10.1021/acs.est.4c07149. Epub 2024 Dec 3.

Abstract

Chloroform and trichloroethanes are pervasive groundwater contaminants for which bioremediation has been an effective treatment strategy. Reductive dehalogenase (RDase) enzymes from organohalide-respiring bacteria are essential for their remediation under anaerobic conditions. RDases are responsible for dehalogenating these chlorinated solvents, leading to their removal. This work explores the kinetic characteristics of three closely related chloroalkane-reductases─TmrA, CfrA, and AcdA─and identifies differences between their activity on chloroform (CF), 1,1,1-trichloroethane (TCA), and 1,1,2-TCA. The side-by-side comparison of these enzymes has emphasized that TmrA and AcdA are specialized toward CF with both having a 4-fold higher maximum specific activity () on CF than 1,1,1-TCA, whereas CfrA has very similar rates on both CF and 1,1,1-TCA. AcdA is the most sensitive to substrate inhibition by CF and 1,1,2-TCA and inhibition by a common cocontaminant trichloroethene. Finally, the reduction of 1,1,2-TCA, which can produce both 1,2-dichloroethane and vinyl chloride, was assessed for each enzyme. Interestingly, each enzyme has a distinct preference for the major product it produces, indicating a favored reaction pathway. Despite over 95% sequence identity, TmrA, CfrA, and AcdA exhibit substantial differences in kinetic behavior, highlighting the importance of understanding such nuances for informed bioremediation strategies.

摘要

氯仿和三氯乙烷是普遍存在的地下水污染物,生物修复是针对它们的一种有效处理策略。来自有机卤化物呼吸细菌的还原脱卤酶(RDase)是在厌氧条件下对其进行修复的关键。RDase负责使这些氯化溶剂脱卤,从而实现它们的去除。这项工作探究了三种密切相关的氯代烷还原酶——TmrA、CfrA和AcdA——的动力学特征,并确定了它们对氯仿(CF)、1,1,1-三氯乙烷(TCA)和1,1,2-TCA的活性差异。对这些酶的并行比较强调,TmrA和AcdA对CF具有特异性,二者对CF的最大比活性()均比对1,1,1-TCA高4倍,而CfrA对CF和1,1,1-TCA的反应速率非常相似。AcdA对CF和1,1,2-TCA的底物抑制以及常见共污染物三氯乙烯的抑制最为敏感。最后,评估了每种酶对1,1,2-TCA的还原作用,1,1,2-TCA还原可生成1,2-二氯乙烷和氯乙烯。有趣的是,每种酶对其产生的主要产物都有明显的偏好,表明存在一种有利的反应途径。尽管TmrA、CfrA和AcdA的序列同一性超过95%,但它们在动力学行为上仍表现出显著差异,这凸显了了解这些细微差别对制定明智的生物修复策略的重要性。

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