Gabriel Sofia I, Hughes Jonathan J, Herman Jeremy S, Baines John F, Giménez Mabel D, Gray Melissa M, Hardouin Emilie A, Payseur Bret A, Ryan Peter G, Sánchez-Chardi Alejandro, Ulrich Rainer G, Mathias Maria da Luz, Searle Jeremy B
CESAM-Centro de Estudos do Ambiente e do Mar, Departamento de Biologia Animal, Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal.
Department of Evolution, Ecology & Organismal Biology, University of California Riverside, Riverside, CA 92521, USA.
Genes (Basel). 2024 Dec 21;15(12):1645. doi: 10.3390/genes15121645.
BACKGROUND/OBJECTIVES: The colonization history of house mice reflects the maritime history of humans that passively transported them worldwide. We investigated western house mouse colonization in the Atlantic region through studies of mitochondrial D-loop DNA sequences from modern specimens.
We assembled a dataset of 758 haplotypes derived from 2765 mice from 47 countries/oceanic archipelagos (a combination of new and published data). Our maximum likelihood phylogeny recovered five previously identified clades, and we used the haplotype affinities within the phylogeny to infer house mouse colonization history, employing statistical tests and indices. From human history, we predefined four European source areas for mice in the Atlantic region (Northern Europe excluding Scandinavia, Southern Europe, Scandinavia, and Macaronesia) and we investigated the colonization from these source areas to different geographic areas in the Atlantic region.
Our inferences suggest mouse colonization of Scandinavia itself from Northern Europe, and Macaronesia from both Southern Europe and Scandinavia/Germany (the latter likely representing the transport of mice by Vikings). Mice on North Atlantic islands apparently derive primarily from Scandinavia, while for South Atlantic islands, North America, and Sub-Saharan Africa, the clearest source is Northern Europe, although mice on South Atlantic islands also had genetic inputs from Macaronesia and Southern Europe (for Tristan da Cunha). Macaronesia was a stopover for Atlantic voyages, creating an opportunity for mouse infestation. Mice in Latin America also apparently had multiple colonization sources, with a strong Southern European signal but also input from Northern Europe and/or Macaronesia.
D-loop sequences help discern the broad-scale colonization history of house mice and new perspectives on human history.
背景/目的:家鼠的殖民历史反映了人类的航海历史,人类在全球范围内被动地运输了家鼠。我们通过对现代样本的线粒体D-loop DNA序列进行研究,调查了大西洋地区西部家鼠的殖民情况。
我们收集了一个数据集,该数据集包含来自47个国家/大洋群岛(新数据和已发表数据的组合)的2765只小鼠的758个单倍型。我们的最大似然系统发育分析恢复了五个先前确定的进化枝,我们利用系统发育中的单倍型亲缘关系,通过统计检验和指标来推断家鼠的殖民历史。从人类历史来看,我们预先定义了大西洋地区家鼠的四个欧洲来源地(不包括斯堪的纳维亚半岛的北欧、南欧、斯堪的纳维亚半岛和马卡罗尼西亚),并研究了这些来源地向大西洋地区不同地理区域的殖民情况。
我们的推断表明,斯堪的纳维亚半岛本身的家鼠是从北欧殖民而来,马卡罗尼西亚的家鼠则来自南欧和斯堪的纳维亚半岛/德国(后者可能代表维京人运输的家鼠)。北大西洋岛屿上的家鼠显然主要来自斯堪的纳维亚半岛,而对于南大西洋岛屿、北美和撒哈拉以南非洲,最明显的来源是北欧,不过南大西洋岛屿上的家鼠也有来自马卡罗尼西亚和南欧(对于特里斯坦 - 达库尼亚群岛)的基因输入。马卡罗尼西亚是大西洋航行的中途停留地,为家鼠滋生创造了机会。拉丁美洲的家鼠显然也有多个殖民来源,有很强的南欧信号,但也有来自北欧和/或马卡罗尼西亚的输入。
D-loop序列有助于识别家鼠的大规模殖民历史以及人类历史的新视角。