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水生环境中芽孢杆菌纲在水和沉积物中的分布。

Distribution of Bacillota in Water and Sediments from Aquatic Environments.

作者信息

Argentino Isabella C V, Godoy Mateus G, Seldin Lucy, Jurelevicius Diogo

机构信息

Universidade Federal do Rio de Janeiro, Instituto de Microbiologia Paulo de Góes, Rio de Janeiro, RJ, Brazil.

出版信息

Microb Ecol. 2025 Feb 12;88(1):3. doi: 10.1007/s00248-024-02482-0.

Abstract

The phylum Bacillota comprises metabolically diverse bacteria with potential relevance in several fields. Although some genera, such as Bacillus and others, have been extensively studied, the distribution of Bacillota in the environment is still poorly understood. This study aimed to analyze the distribution of Bacillota present in water and sediment samples from different environments. For this purpose, water (W) and sediment (S) samples were collected from different marine environments (Dois Rios Beach - DR, Abraão Beach - AB, Massambaba Beach - MB, and Guanabara Bay - GB), freshwater lagoons (Jacarepiá Lagoon- JL) and hypersaline lagoons (Vermelha Lagoon - VL), all of which are located in Rio de Janeiro, Brazil. The microbial communities present in each sample were determined by sequencing 16S rRNA-encoding genes. The distribution and diversity of Bacillota were analyzed via QIIME2. The results revealed that Bacillota represented an average of 1% of the microbial community of aquatic microbiomes and were unevenly distributed in aquatic water and sediment. The highest abundances of Bacillota were detected in JL_S and VL_S, and the lowest abundances were observed in MB_W and AB_W. Only sequences related to the Bacilli and Clostridia classes were identified. The main Bacillota genera identified were Bacillus and an unidentified Clostridiales order genus. The VL_S and JL_S samples had the highest numbers of exclusive Bacillota genera. On the other hand, 15 Bacillota genera, which are generally observed in the human and animal guts, were found only in anthropogenically impacted GB_W and AB_W. The obtained results revealed how Bacillota are distributed in different aquatic environments.

摘要

厚壁菌门包含代谢多样的细菌,在多个领域具有潜在相关性。尽管一些属,如芽孢杆菌属等,已得到广泛研究,但厚壁菌门在环境中的分布仍知之甚少。本研究旨在分析不同环境的水和沉积物样本中厚壁菌门的分布情况。为此,从不同海洋环境(多伊斯里奥斯海滩 - DR、阿布拉昂海滩 - AB、马桑巴巴海滩 - MB和瓜纳巴拉湾 - GB)、淡水泻湖(雅卡雷皮阿泻湖 - JL)和超咸水泻湖(韦尔梅利亚泻湖 - VL)采集了水(W)和沉积物(S)样本,所有这些地点均位于巴西里约热内卢。通过对编码16S rRNA的基因进行测序来确定每个样本中的微生物群落。利用QIIME2分析厚壁菌门的分布和多样性。结果显示,厚壁菌门平均占水生微生物群落的1%,在水体和沉积物中的分布不均衡。在JL_S和VL_S中检测到厚壁菌门的丰度最高,而在MB_W和AB_W中观察到的丰度最低。仅鉴定出与芽孢杆菌纲和梭菌纲相关的序列。鉴定出的主要厚壁菌门属为芽孢杆菌属和一个未鉴定的梭菌目属。VL_S和JL_S样本中独特的厚壁菌门属数量最多。另一方面,通常在人类和动物肠道中观察到的15个厚壁菌门属仅在受人为影响的GB_W和AB_W中发现。所得结果揭示了厚壁菌门在不同水生环境中的分布情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0780/11821768/ba45279dd2f7/248_2024_2482_Fig1_HTML.jpg

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