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(Z)-N-(3-([1,1'-联苯]-2-基)-4-庚基-4-羟基噻唑烷-2-亚基)-4-溴苯甲酰胺作为碳酸酐酶抑制剂:其体外和计算机模拟研究探索

(Z)-N-(3-([1,1'-biphenyl]-2-yl)-4-heptyl-4-hydroxythiazolidin-2-ylidene)-4-bromobenzamide as carbonic anhydrase inhibitor: exploration of its in vitro and in silico studies.

作者信息

Ahmed Aftab, Ilyas Sara, Channar Pervaiz Ali, Ejaz Syeda Abida, Saeed Aamer, Ghumro Seema Sarwar, Khasawneh Mohamad Ahmad Saleem, Channar Shagufta Naz, Ujan Rabail, Abbas Qamar, Hökelek Tuncer

机构信息

Department of Pharmaceutical Chemistry, Faculty of Pharmacy, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan.

Department of Chemistry Quaid-I-Azam University, Islamabad, 45320, Pakistan.

出版信息

BMC Chem. 2025 Mar 10;19(1):65. doi: 10.1186/s13065-025-01423-3.

Abstract

Human Carbonic Anhydrase inhibitors (CAIs) have been clinically used to treat a variety of disorders, such as cancer, obesity, haemolytic anaemia, glaucoma, retinopathy, and epilepsy. To develop a Carbonic Anhydrase inhibitor, Iminothiazoline analogue ((Z)-N-(3-([1,1'-biphenyl]-2-yl)-4-heptyl-4-hydroxythiazolidin-2-ylidene)-4-bromobenzamide) was synthesized and characterized. Single crystal X-Ray diffraction studies and Hirshfeld surface analysis (HSA) were conducted to find the exact molecular structure as well as intermolecular interactions. DFT Calculations indicated the soft and reactive nature of molecule. In-Vitro carbonic anhydrase inhibition studies showed the excellent inhibition potential of (Z)-N-(3-([1,1'-biphenyl]-2-yl)-4-heptyl-4-hydroxythiazolidin-2-ylidene)-4-bromobenzamide (IC value of 0.147 ± 0.03 µM). Four hydrogen bonds and a multiple hydrophobic interactions were observed between synthesized molecule and the enzyme during Molecular docking studies. Molecular dynamic simulation studies showed that Protein-ligand complex generally remained stable throughout the time. ADMET studies suggested the need of structural modification for the drug like behavior of synthesized molecule.

摘要

人类碳酸酐酶抑制剂(CAIs)已被临床用于治疗多种疾病,如癌症、肥胖症、溶血性贫血、青光眼、视网膜病变和癫痫。为了开发一种碳酸酐酶抑制剂,合成并表征了亚氨基噻唑啉类似物((Z)-N-(3-([1,1'-联苯]-2-基)-4-庚基-4-羟基噻唑烷-2-亚基)-4-溴苯甲酰胺)。进行了单晶X射线衍射研究和 Hirshfeld 表面分析(HSA),以确定精确的分子结构以及分子间相互作用。密度泛函理论(DFT)计算表明了该分子的柔软性和反应活性。体外碳酸酐酶抑制研究表明(Z)-N-(3-([1,1'-联苯]-2-基)-4-庚基-4-羟基噻唑烷-2-亚基)-4-溴苯甲酰胺具有优异的抑制潜力(IC值为0.147±0.03 μM)。在分子对接研究中,观察到合成分子与酶之间存在四个氢键和多种疏水相互作用。分子动力学模拟研究表明,蛋白质-配体复合物在整个过程中通常保持稳定。ADMET研究表明,需要对合成分子的药物样行为进行结构修饰。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9e0/11892125/ca74e31d012f/13065_2025_1423_Fig1_HTML.jpg

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