Dababneh Saif F, Babini Hosna, Jiménez-Sábado Verónica, Teves Sheila S, Kim Kyoung-Han, Tibbits Glen F
Department of Cellular and Physiological Sciences, University of British Columbia, Vancouver, BC V6T 1Z3, Canada; Cellular and Regenerative Medicine Centre, BC Children's Hospital Research Institute, 938 West 28th Avenue, Vancouver, BC V5Z 4H4, Canada.
Cellular and Regenerative Medicine Centre, BC Children's Hospital Research Institute, 938 West 28th Avenue, Vancouver, BC V5Z 4H4, Canada; Departments of Molecular Biology and Biochemistry / Biomedical Physiology and Kinesiology, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.
Stem Cell Reports. 2025 Apr 8;20(4):102467. doi: 10.1016/j.stemcr.2025.102467. Epub 2025 Mar 20.
Advancements in genomics have revealed hundreds of loci associated with cardiovascular diseases, highlighting the role genetic variants play in disease pathogenesis. Notably, most variants lie within noncoding genomic regions that modulate transcription factor binding, chromatin accessibility, and thereby the expression levels and cell type specificity of gene transcripts. Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) have emerged as a powerful tool to delineate the pathogenicity of such variants and elucidate the underlying transcriptional mechanisms. Our review discusses the basics of noncoding variant-mediated pathogenesis, the methodologies utilized, and how hiPSC-based heart models can be leveraged to dissect the mechanisms of noncoding variants.
基因组学的进展揭示了数百个与心血管疾病相关的基因座,突出了基因变异在疾病发病机制中的作用。值得注意的是,大多数变异位于非编码基因组区域,这些区域调节转录因子结合、染色质可及性,从而影响基因转录本的表达水平和细胞类型特异性。人诱导多能干细胞衍生的心肌细胞(hiPSC-CMs)已成为一种强大的工具,用于描述此类变异的致病性并阐明潜在的转录机制。我们的综述讨论了非编码变异介导的发病机制的基础知识、所采用的方法,以及如何利用基于hiPSC的心脏模型来剖析非编码变异的机制。