Liu Jia, Wu Cang, Liu Yuyang, Chen Qiangou, Ding Yuzhen, Lin Zhiqiao, Pan Lifeng, Xiao Kang, Li Jianchao, Liu Zhongmin, Liu Wei
Shenzhen Key Laboratory for Neuronal Structural Biology, Biomedical Research Institute, Shenzhen Peking University-The Hong Kong University of Science and Technology Medical Center, Shenzhen, 518036, Guangdong, China.
Department of Immunology and Microbiology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, 518055, Guangdong, China.
Nat Commun. 2025 Apr 1;16(1):3120. doi: 10.1038/s41467-025-58261-z.
Serine/threonine-protein phosphatases with EF-hands (PPEFs) are a family of highly conserved proteins implicated in cancer and neuronal degeneration. The initially characterized member, Drosophila melanogaster retinal degeneration C (RDGC) contains a calmodulin (CaM)-interacting extended-IQ motif and a Ca-binding EF-like/EF-hand tandem. However, the molecular regulation of PPEF is poorly understood. In this study, we use cryogenic-electron microscopy to delineate the structures of the RDGC/CaM holoenzyme. In the absence of Ca, CaM and the EF-like/EF-hand tandem allow the extended-IQ motif to block substrate access to the catalytic sites, constituting an auto-inhibitory mechanism. Upon Ca binding, CaM and the EF-like/EF-hand tandem drive drastic conformational changes in the extended-IQ motif to unlock the catalytic sites. This dual Ca-sensor-mediated activation is evolutionarily conserved in mammals. This study provides mechanistic insight into the molecular activation of PPEFs, paving the way for the development of therapeutic strategies for PPEF-related human diseases.
含EF手型结构域的丝氨酸/苏氨酸蛋白磷酸酶(PPEFs)是一类高度保守的蛋白质,与癌症和神经元变性有关。最初被鉴定的成员,果蝇视网膜变性C(RDGC)包含一个与钙调蛋白(CaM)相互作用的延伸IQ基序和一个钙结合EF样/EF手型串联结构。然而,PPEF的分子调控机制尚不清楚。在本研究中,我们使用低温电子显微镜来描绘RDGC/CaM全酶的结构。在没有钙的情况下,CaM和EF样/EF手型串联结构使延伸IQ基序能够阻止底物进入催化位点,构成一种自抑制机制。钙结合后,CaM和EF样/EF手型串联结构驱动延伸IQ基序发生剧烈构象变化,从而打开催化位点。这种双钙传感器介导的激活在哺乳动物中具有进化保守性。本研究为PPEFs的分子激活提供了机制性见解,为开发与PPEF相关人类疾病的治疗策略铺平了道路。