Habib Ihab, Khan Mushtaq, Lakshmi Glindya Bhagya, Mohamed Mohamed-Yousif Ibrahim, Ghazawi Akela, Al-Rifai Rami H
Veterinary Public Health Research Laboratory, Department of Veterinary Medicine, College of Agriculture and Veterinary Medicine, United Arab Emirates University, Al Ain P.O. Box 15551, United Arab Emirates.
ASPIRE Research Institute for Food Security in the Drylands (ARIFSID), United Arab Emirates University, Al Ain P.O. Box 15551, United Arab Emirates.
Foods. 2025 Mar 26;14(7):1150. doi: 10.3390/foods14071150.
This study investigates the occurrence, antimicrobial resistance (AMR) profiles, virulence factors, and plasmid composition of species isolated from salad ingredients in the United Arab Emirates (UAE). Four hundred salad vegetable items collected from local markets, over ten months through 2023, were screened, yielding an detection rate of 85.5% (342/400). was the most commonly identified species (50%), followed by (20%) and (16%). Among 85 isolates tested for antimicrobial susceptibility, 55.3% displayed resistance to at least one agent, with 18.8% classified as multidrug-resistant (MDR). All isolates were not resistant to ampicillin, linezolid, teicoplanin, tigecycline, and high-level gentamicin. Intrinsic phenotypic resistance to vancomycin was found in and , while low-level (<5%) ciprofloxacin and erythromycin resistance was sporadically detected in and . Whole-genome sequencing (WGS) of 14 isolates (nine , four , and one ) unveiled a complex resistome. We report the first detection in salad vegetables of vancomycin resistance genes (, ) in a vancomycin-susceptible isolate. Identifying , , and genes in the studied isolates further underscored emerging resistance to tetracyclines, macrolides, and oxazolidinones. Concurrently, virulence gene analysis revealed 74 putative virulence factors, with harboring a higher diversity of biofilm-related and exoenzyme-encoding genes. One strain carried the cytolysin cluster (, , ), highlighting its pathogenic potential. Plasmid profiling identified 19 distinct plasmids, ranging from 3845 bp to 133,159 bp. Among the genome-sequenced isolates, mobilizable plasmids (47.3%) commonly carried AMR genes, especially () and (), whereas conjugative plasmids (10.5%) did not harbor resistance determinants. These findings highlight that salad vegetables can still harbor and potentially transmit strains with clinically relevant resistance determinants and virulence traits. Enhancing foodborne AMR surveillance with WGS and targeted interventions is key to controlling its spread in the food.
本研究调查了从阿拉伯联合酋长国(UAE)沙拉食材中分离出的物种的发生情况、抗菌药物耐药性(AMR)谱、毒力因子和质粒组成。在2023年的十个月里,从当地市场收集了400份沙拉蔬菜样本进行筛查,检出率为85.5%(342/400)。[具体物种名1]是最常鉴定出的物种(50%),其次是[具体物种名2](20%)和[具体物种名3](16%)。在85株进行抗菌药物敏感性测试的分离株中,55.3%对至少一种药物耐药,18.8%被归类为多重耐药(MDR)。所有分离株对氨苄西林、利奈唑胺、替考拉宁、替加环素和高水平庆大霉素均不耐药。在[具体物种名4]和[具体物种名5]中发现了对万古霉素的固有表型耐药性,而在[具体物种名6]和[具体物种名7]中偶尔检测到低水平(<5%)的环丙沙星和红霉素耐药性。对14株分离株(9株[具体物种名8]、4株[具体物种名9]和1株[具体物种名10])进行全基因组测序(WGS)揭示了一个复杂的耐药组。我们报告了在一株对万古霉素敏感的[具体物种名11]分离株中首次在沙拉蔬菜中检测到万古霉素耐药基因([具体基因名1]、[具体基因名2])。在研究的分离株中鉴定出[具体基因名3]、[具体基因名4]和[具体基因名5]基因,进一步凸显了对四环素、大环内酯类和恶唑烷酮类药物新出现的耐药性。同时,毒力基因分析揭示了74个推定的毒力因子,[具体物种名12]含有更多与生物膜相关和外酶编码基因的多样性。一株[具体物种名*]菌株携带细胞溶素簇([具体基因名6]、[具体基因名7]、[具体基因名8]),突出了其致病潜力。质粒分析鉴定出19种不同的质粒,大小从3845 bp到133,159 bp不等。在进行基因组测序的分离株中,可移动质粒(47.3%)通常携带AMR基因,尤其是([具体基因名9])和([具体基因名10]),而接合质粒(10.5%)不携带耐药决定簇。这些发现突出表明,沙拉蔬菜仍可能携带并潜在传播具有临床相关耐药决定簇和毒力特征的[具体物种名*]菌株。通过WGS加强食源AMR监测和针对性干预是控制其在食品中传播的关键。