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龙眼TIFY家族的全基因组鉴定及其在花青素合成中的潜在功能分析

Genome-Wide Identification of the TIFY Family in Longan and Their Potential Functional Analysis in Anthocyanin Synthesis.

作者信息

Qing Haowei, Wu Ziang, Mo Xiao, Wei Jinjv, Shi Yuyu, Guo Huiqin, Xu Jiongzhi, Ding Feng, Zhang Shuwei

机构信息

Guangxi Key Laboratory of Genetic Improvement of Crops/Guangxi Academy of Agricultural Sciences, Nanning 530007, China.

College of Agriculture, Guangxi University, Nanning 530007, China.

出版信息

Biology (Basel). 2025 Apr 1;14(4):364. doi: 10.3390/biology14040364.

Abstract

TIFY is one of the plant-specific transcription factors, which is extensively involved in regulating plant development, stress response, and biosynthesis of secondary metabolites. In this study, we identified 19 genes from the longan genome data. All of them contained the conserved TIFY domain, and these 19 were distributed on 9 out of the 15 chromosomes of longan. A phylogenetic tree was constructed based on the TIFY protein sequences from , rice, orange, and grape. They were clustered into six groups, with the TIFYs from longan showing the closest homology to those from orange. Duplication events were present between and , and , and and . There are several light-responsive elements, Abscisic Acid (ABA)-, Gibberellic Aci (GA)-, and Methyl Jasmonate (MeJA)-responsive elements, in the promoter regions of longan genes. Additionally, the flavonoid biosynthetic gene regulation elements were presented in the promoter of , , and , suggesting their involvement in flavonoid synthesis regulation of longan. We also found that the expression of in the stem and pericarp was significantly higher than that in other tissues. Interestingly, the outer edge of the corolla exhibited a green hue with a faint reddish tint across the corolla in transgenic tobacco plants overexpressing . Subcellular localization experiments confirmed that DlTIFY7 is expressed in the nucleus. These findings suggest that may serve as a novel candidate transcription factor negatively regulating anthocyanin synthesis in longan. This study provides valuable insights into the functional characterization of longan genes and lays a foundation for future research on their roles in regulating plant development and secondary metabolism.

摘要

TIFY是植物特有的转录因子之一,广泛参与植物发育、胁迫响应和次生代谢产物的生物合成调控。在本研究中,我们从龙眼基因组数据中鉴定出19个基因。它们均含有保守的TIFY结构域,且这19个基因分布在龙眼15条染色体中的9条上。基于来自水稻、橙子和葡萄的TIFY蛋白序列构建了系统发育树。它们被聚类为六组,其中龙眼的TIFYs与橙子的TIFYs显示出最密切的同源性。在[具体物种1]与[具体物种2]、[具体物种3]与[具体物种4]、[具体物种5]与[具体物种6]之间存在重复事件。在龙眼TIFY基因的启动子区域有几个光响应元件、脱落酸(ABA)响应元件、赤霉素(GA)响应元件和茉莉酸甲酯(MeJA)响应元件。此外,在[具体基因1]、[具体基因2]和[具体基因3]的启动子中存在类黄酮生物合成基因调控元件,表明它们参与龙眼类黄酮合成调控。我们还发现[具体基因4]在茎和果皮中的表达显著高于其他组织。有趣的是,在过表达[具体基因4]的转基因烟草植株中,花冠外缘呈现绿色色调,整个花冠带有淡淡的红色。亚细胞定位实验证实DlTIFY7在细胞核中表达。这些发现表明[具体基因4]可能作为一种新型候选转录因子负调控龙眼花青素的合成。本研究为龙眼TIFY基因的功能表征提供了有价值的见解,并为其在调控植物发育和次生代谢中的作用的未来研究奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0023/12024962/c4ed76c73ce8/biology-14-00364-g001.jpg

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