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解读遗传性视网膜营养不良的基因谜题:来自土耳其队列的新见解

Decoding the Genetic Puzzle of Inherited Retinal Dystrophies: Novel Insights From a Turkish Cohort.

作者信息

Demir Şenol, Ateş Esra Arslan, Sevik Orkun, Sözer Bengisu, Köse Tuğba, Şahin Özlem, Arman Ahmet, Geçkinli Bilgen Bilge

机构信息

Department of Medical Genetics, School of Medicine, Marmara University, Istanbul, Turkey.

Department of Medical Genetics, Istanbul University-Cerrahpaşa, Cerrahpaşa Faculty of Medicine, Istanbul, Turkey.

出版信息

Clin Genet. 2025 May 15. doi: 10.1111/cge.14769.

Abstract

Inherited retinal dystrophies (IRDs) are genetic disorders characterized by retinal pigment epithelium or photoreceptor degeneration. Advances in molecular diagnostic technologies, particularly next-generation sequencing (NGS), have facilitated the identification of disease-causing variants; however, population-specific genetic data, especially for Turkish cohorts, remain limited. This study aims to investigate the genetic profile of IRD patients in a Turkish cohort and assess the diagnostic utility of NGS-based gene panel testing. A total of 94 patients diagnosed with IRDs were included in the study. Genomic DNA was extracted from the peripheral blood of patients who met the inclusion and exclusion criteria. NGS was performed to analyze 141 genes associated with IRDs, following current clinical guidelines and utilizing up-to-date variant databases. Among the 94 patients, 97 variants were identified in 70 patients (74%). Of these, 58 variants (59.79%) were classified as pathogenic and 39 variants (40.21%) as likely pathogenic. Additionally, 28 variants (28%) were novel and have not been previously reported in the literature. Our findings demonstrate that NGS is a powerful tool for the molecular diagnosis of IRDs and emphasizes the genetic diversity of IRDs in the Turkish population. The identification of novel variants also highlights the need for continued variant curation and population-specific studies to enhance diagnostic accuracy and genetic counseling.

摘要

遗传性视网膜营养不良(IRDs)是一类以视网膜色素上皮或光感受器变性为特征的遗传性疾病。分子诊断技术的进步,尤其是下一代测序(NGS),促进了致病变异的识别;然而,特定人群的遗传数据,特别是土耳其人群的数据仍然有限。本研究旨在调查土耳其人群中IRD患者的基因谱,并评估基于NGS的基因panel检测的诊断效用。共有94名被诊断为IRD的患者纳入本研究。从符合纳入和排除标准的患者外周血中提取基因组DNA。按照当前临床指南并利用最新的变异数据库,进行NGS以分析与IRD相关的141个基因。在94名患者中,70名患者(74%)共鉴定出97个变异。其中,58个变异(59.79%)被分类为致病的,39个变异(40.21%)被分类为可能致病的。此外,28个变异(28%)是新发现的,此前文献中未曾报道过。我们的研究结果表明,NGS是IRD分子诊断的有力工具,并强调了土耳其人群中IRD的遗传多样性。新变异的识别也凸显了持续进行变异整理和特定人群研究以提高诊断准确性和遗传咨询的必要性。

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