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通过比较基因组杂交揭示的蝽科(半翅目)真蝽中重复序列的可变组织和XY性染色体的隐藏多样性

Variable organization of repeats and hidden diversity of XY sex chromosomes in Pentatomidae true Bugs (Hemiptera) revealed through comparative genomic hybridization.

作者信息

Milani Diogo, Bardella Vanessa B, Hickmann Frederico, Corrêa Alberto S, Michel Andrew P, Mora Pablo, Rico-Porras José M, Palomeque Teresa, Lorite Pedro, Cabral-de-Mello Diogo C

机构信息

Departamento de Biologia Geral e Aplicada, Instituto de Biociências/IB, UNESP- Universidade Estadual Paulista, Rio Claro, São Paulo, 13506-900, Brazil.

Deptartment of Entomology and Acarology, Luiz de Queiroz College of Agriculture, USP/ESALQ, Univ of São Paulo, Piracicaba, SP, Brazil.

出版信息

Chromosoma. 2025 May 26;134(1):4. doi: 10.1007/s00412-025-00831-7.

Abstract

Sex chromosomes have independently evolved in various species, displaying unique evolutionary patterns, including differentiation, degeneration, and repetitive DNA accumulation. Pentatomidae hemipterans are characterized by a highly conserved diploid number of 2n = 14 with a XX/XY sex chromosome system, i.e. 2n = 14, 12 A + XY. Thus, it represents an interesting group for investigating the reorganization of repeats in conserved karyotypes, i.e. the absence of large chromosomal rearrangements. Using comparative genomic hybridization (CGH) with male and female genomic DNAs (gDNA), this study examined a total of 25 Pentatomidae species to uncover repetitive DNA dynamics and their role in chromosome differentiation, especially sex chromosome differentiation. New karyotype data for nine species reinforces the chromosomal stasis in Pentatomidae for macro-chromosomal structure. However, significant variability in repetitive DNA patterns on autosomes and sex chromosomes has been revealed despite the karyotypic conservation. Autosomal signals varied in intensity and distribution, with some species exhibiting terminal enrichment of repeats, while others displayed dispersed patterns. Sex chromosomes showed distinct hybridization patterns, with the Y chromosome exhibiting more significant variability compared to the X. These findings emphasize the dynamic nature of sex chromosomes and suggest further studies combining genomic sequencing and cytogenetics to uncover sequences and the mechanisms behind their evolution.

摘要

性染色体在不同物种中独立进化,呈现出独特的进化模式,包括分化、退化和重复DNA积累。蝽科半翅目昆虫的特点是二倍体数目高度保守,为2n = 14,具有XX/XY性染色体系统,即2n = 14,12条常染色体+ XY。因此,它是研究保守核型中重复序列重组(即不存在大的染色体重排)的一个有趣的类群。本研究使用雄性和雌性基因组DNA(gDNA)进行比较基因组杂交(CGH),共检测了25种蝽科昆虫,以揭示重复DNA的动态变化及其在染色体分化尤其是性染色体分化中的作用。9个物种的新核型数据强化了蝽科在宏观染色体结构上的染色体稳定性。然而,尽管核型保守,但常染色体和性染色体上的重复DNA模式仍存在显著差异。常染色体信号在强度和分布上各不相同,一些物种的重复序列在末端富集,而另一些则呈现分散模式。性染色体显示出明显的杂交模式,Y染色体比X染色体表现出更大的变异性。这些发现强调了性染色体的动态性质,并建议进一步结合基因组测序和细胞遗传学进行研究,以揭示其序列及其进化背后的机制。

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