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(异鳃亚纲,笠贝科)的完整线粒体基因组及其系统发育意义。

The complete mitochondrial genome of (Heterobranchia, Siphonariidae) and its phylogenetic implications.

作者信息

Ma Chao, Meng Lingli, Wang Xiyao, Liu Yimeng, Li Yaoyao, Liu Yunguo

机构信息

College of Life Sciences, Linyi University, Linyi 276005, China Linyi University Linyi China.

College of Food Science, Nanchang University, Nanchang 330047, China Nanchang University Nanchang China.

出版信息

Zookeys. 2025 Jun 6;1240:257-276. doi: 10.3897/zookeys.1240.141126. eCollection 2025.

Abstract

The gastropod , belonging to the family Siphonariidae, is an important grazer in the rocky intertidal zone of China, possessing significant ecological functions and medicinal value. To enrich the diversity of mitochondrial genomes in Gastropoda and to gain insights into their phylogenetic relationships, the mitochondrial genome of (13,966 bp) was sequenced using next-generation sequencing. The genome comprises 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes; the gene organization, nucleotide composition, and codon usage are consistent with other Heterobranchia species. Notably, comparisons of mitochondrial gene rearrangements indicated that Siphonariidae exhibit extensive and irregular rearrangements within Heterobranchia. Further, we reconstructed the most comprehensive phylogenetic analysis of Gastropoda based on 13 concatenated protein-coding genes. Each subclass of Gastropoda formed a monophyletic clade, with Heterobranchia positioned at the base of the tree, and has a sister relationship with . The findings of this study will contribute to a better understanding of the characteristics of the mitogenome, provide valuable insights into the phylogenetic relationships within Gastropoda, and underscore the utility of mitochondrial genomes in systematics.

摘要

这种腹足纲动物属于虹蛹螺科,是中国岩石潮间带重要的食草动物,具有重要的生态功能和药用价值。为了丰富腹足纲线粒体基因组的多样性并深入了解它们的系统发育关系,利用二代测序技术对[物种名称]的线粒体基因组(13,966 bp)进行了测序。该基因组包含13个蛋白质编码基因、22个tRNA基因和2个rRNA基因;基因组织、核苷酸组成和密码子使用情况与其他异鳃类物种一致。值得注意的是,线粒体基因重排的比较表明,虹蛹螺科在异鳃类中表现出广泛且不规则的重排。此外,我们基于13个串联的蛋白质编码基因构建了腹足纲最全面的系统发育分析。腹足纲的每个亚纲都形成一个单系类群,异鳃类位于树的基部,[物种名称]与[另一物种名称]具有姐妹关系。本研究结果将有助于更好地了解[物种名称]线粒体基因组的特征,为腹足纲内部的系统发育关系提供有价值的见解,并强调线粒体基因组在系统分类学中的实用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d2a/12166384/3bad2d8b5673/zookeys-1240-257_article-141126__-g001.jpg

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