Piccirilli Alessandra, Perilli Mariagrazia, Brisdelli Fabrizia, Mastrippolito Dario, D'Olimpio Gianluca, Ershadrad Soheil, Sanyal Biplab, Ottaviano Luca
Department of Biotechnological and Applied Clinical Sciences, University of L'Aquila L'Aquila Italy.
Department of Physical and Chemical Sciences, University of L'Aquila L'Aquila Italy
RSC Adv. 2025 Jun 23;15(26):21199-21211. doi: 10.1039/d5ra01697e. eCollection 2025 Jun 16.
We report an extensive survey of the inhibition effect of graphene oxide (GO) on the enzymatic activity of β-lactamases (BLs), namely: serine β-lactamases (SBLs) SHV-1, CTX-M-15, GES-1, KPC-3, OXA-23, and metallo-β-lactamases (MBLs) (NDM-1, VIM-1, CphA, and L1). The inhibition study has been performed with GO dose-dependent kinetic assays (using nitrocefin as a substrate). On all the SBLs, a formidable inhibition activity is demonstrated already at a GO concentration of 0.5 µg ml. Inhibition is observed for all the MBLs in the monomeric phase. For MBLs, the interaction mechanism with GO has been directly investigated with X-ray photoemission spectroscopy, focusing on the interaction of NDM-1 with GO. Data do not show any specific interaction with GO of the Zn atoms at the active site of the enzyme, while a detailed analysis of the C 1s and N 1s core levels points to the interaction of GO with the enzyme its positive residues, indicating a non-competitive inhibition mechanism. Together with the modeling of the nitrocefin-GO system with density functional theory, we demonstrate that the GO basal plane links the substrate molecule oxidation of one of the two sulfur atoms of the substrate, strongly reducing the inhibition effectiveness if GO is pre-incubated with the substrate.
我们报告了一项关于氧化石墨烯(GO)对β-内酰胺酶(BLs)酶活性抑制作用的广泛研究,这些β-内酰胺酶包括:丝氨酸β-内酰胺酶(SBLs)SHV-1、CTX-M-15、GES-1、KPC-3、OXA-23,以及金属β-内酰胺酶(MBLs)(NDM-1、VIM-1、CphA和L1)。抑制研究采用了GO剂量依赖性动力学测定法(以头孢硝噻吩作为底物)。对于所有的SBLs,在GO浓度为0.5 μg/ml时就已显示出强大的抑制活性。在单体相中观察到所有MBLs都有抑制作用。对于MBLs,已通过X射线光电子能谱直接研究了其与GO的相互作用机制,重点是NDM-1与GO的相互作用。数据未显示酶活性位点的锌原子与GO有任何特异性相互作用,而对C 1s和N 1s核心能级的详细分析表明GO与酶的正性残基相互作用,表明存在非竞争性抑制机制。结合用密度泛函理论对头孢硝噻吩-GO体系进行的建模,我们证明GO基面连接底物分子并氧化底物两个硫原子中的一个,如果GO与底物预孵育,则会大大降低抑制效果。