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利用小RNA作为细菌中的合成转录后调控因子

Harnessing Small RNAs as Synthetic Post-transcriptional Regulators in Bacteria.

作者信息

Georg Jens, Berghoff Bork A, Schindler Daniel

机构信息

Institut für Biologie III, Albert-Ludwigs-Universität Freiburg, Schänzlestraße 1, 79104 Freiburg, Germany.

Institute of Molecular Biology and Biotechnology of Prokaryotes, University of Ulm, Albert-Einstein-Allee 11, 89081 Ulm, Germany.

出版信息

ACS Synth Biol. 2025 Jul 18;14(7):2405-2417. doi: 10.1021/acssynbio.5c00118. Epub 2025 Jul 8.

Abstract

Bacteria can respond to environmental changes by expressing small RNAs (sRNAs), which regulate mRNAs by complementary base-pairing. This regulatory mechanism allows bacteria to rapidly adapt their proteome. In recent years, sRNAs have gained attention as blueprints for synthetic regulators allowing control over user-defined targets. Multiple aspects need to be considered for efficient application of these versatile, on-demand, and easy-to-use tools. Advances in computational prediction and bioengineering concepts are the dawn of systematic synthetic sRNA biology. We provide an overview of sRNAs and alternative post-transcriptional regulators, highlight the requirements for successful regulation, and provide guidelines for design, construction, and sRNA application.

摘要

细菌可以通过表达小RNA(sRNA)来响应环境变化,这些小RNA通过互补碱基配对来调节mRNA。这种调节机制使细菌能够迅速调整其蛋白质组。近年来,sRNA作为合成调节因子的蓝图受到关注,可用于控制用户定义的靶标。要有效应用这些多功能、按需定制且易于使用的工具,需要考虑多个方面。计算预测和生物工程概念的进展是系统合成sRNA生物学的开端。我们概述了sRNA和替代性转录后调节因子,强调成功调节的要求,并提供设计、构建和sRNA应用的指导方针。

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