García de la Concepción Juan, Cintas Pedro, Martínez Rafael Fernando
Departamento de Química Orgánica e Inorgánica, Facultad de Ciencias, Instituto Universitario de Investigación del Agua, Cambio Climático y Sostenibilidad (IACYS), Universidad de Extremadura, Avenida de Elvas s/n, 06006 Badajoz, Spain.
Molecules. 2025 Jun 27;30(13):2770. doi: 10.3390/molecules30132770.
In the realm of click-type reactions and their application to bioorthogonal chemistry in living organisms, metal-free [3+2] cycloadditions involving mesoionic rings and strained cycloalkynes have gained increasing attention and potentiality in recent years. While there has been a significant accretion of experimental data, biological assays, and assessments of reaction mechanisms, some pieces of the tale are still missing. For instance, which structural and/or stereoelectronic effects are actually interlocked and which remain unplugged. With the advent of data-driven methods, including machine learning simulations, quantitative estimations of relevant observables and their correlations will explore better the chemical space of these transformations. Here we unveil a series of linear relationships, such as Hammett-type correlations, as well as deviations of linearity, using the case study of phenylsydnone (and its 4-aryl-substituted derivatives) with a highly reactive bicyclo[6.1.0]nonyne carbinol. Through accurate estimation of activation barriers and prediction of rate constants, our findings further increase the significance of integrating strain release and electronic effects in organic reactivity. Moreover, such results could pave the way to use mesoionics cycloadditions as probes for measuring the extent of delocalization-assisted strain release, which can be applied to related reactions involving dipoles and strained rings.
在点击型反应及其在活生物体生物正交化学中的应用领域,近年来,涉及中氮茚环和张力环炔烃的无金属[3+2]环加成反应受到了越来越多的关注,并展现出巨大潜力。尽管已经积累了大量的实验数据、生物学分析以及反应机理评估,但仍有一些情况尚不明确。例如,哪些结构和/或立体电子效应实际上相互关联,哪些仍未得到解释。随着包括机器学习模拟在内的数据驱动方法的出现,对相关可观测量及其相关性的定量估计将更好地探索这些转化的化学空间。在此,我们以苯基西德诺酮(及其4-芳基取代衍生物)与高反应性双环[6.1.0]壬炔甲醇的案例研究为例,揭示了一系列线性关系,如哈米特型相关性以及线性偏差。通过准确估计活化能垒和预测速率常数,我们的研究结果进一步凸显了在有机反应性中整合应变释放和电子效应的重要性。此外,这些结果可能为利用中氮茚环加成反应作为测量离域辅助应变释放程度的探针铺平道路,这可应用于涉及偶极子和张力环的相关反应。