Anderson Trevor, Wang Hui, Harrington Michael, Howard Julia C, Otte Erik
Canterbury Health Laboratories, Christchurch Hospital, Health New Zealand, Christchurch, Canterbury, New Zealand.
Access Microbiol. 2025 Jul 16;7(7). doi: 10.1099/acmi.0.000916.v4. eCollection 2025.
(SARG) was discovered in 2009 as part of the (SAUR) complex and has been documented from various locations worldwide. In this article, we describe the genomic features of five strains of SARG found in Christchurch, New Zealand. Isolates were first detected in 2019 using MALDI-TOF identification, and their identities were confirmed using whole-genome sequencing. Genomic features, including antimicrobial resistance markers and virulence factors, were compared with other SARG sequences in the NCBI GenBank and well-characterized features in SAUR. Four isolates belonged to ST2250 and one isolate to ST2793. Phylogenetic analysis based on core genome analysis revealed that all five isolates were phylogenetically distinct, with four isolates clustering in the ST2250 clade. Three isolates contained staphylococcal cassette chromosome (SCC) type IV 2Bc, harbouring the gene conferring resistance to beta-lactam antibiotics. All five strains shared many of the virulence genes found in the global SARG and SAUR isolates; however, no TSST-1 or PVL pathogenic genes were detected. This publication contributes additional data on global occurrences and genomic features of SARG.
葡萄球菌属相关基因组(SARG)于2009年作为葡萄球菌属相关上游调节子(SAUR)复合体的一部分被发现,并已在全球各地有记录。在本文中,我们描述了在新西兰克赖斯特彻奇发现的5株SARG的基因组特征。这些分离株于2019年首次通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF)鉴定检测到,并通过全基因组测序确认了它们的身份。将包括抗菌药物耐药标记和毒力因子在内的基因组特征与NCBI基因库中的其他SARG序列以及SAUR中特征明确的特征进行了比较。4株分离株属于ST2250,1株分离株属于ST2793。基于核心基因组分析的系统发育分析表明,所有5株分离株在系统发育上都是不同的,其中4株分离株聚集在ST2250分支中。3株分离株含有IV型葡萄球菌盒式染色体(SCC)2Bc,携带赋予对β-内酰胺类抗生素耐药性的基因。所有5株菌株都共享了在全球SARG和SAUR分离株中发现的许多毒力基因;然而,未检测到中毒性休克综合征毒素-1(TSST-1)或杀白细胞素(PVL)致病基因。本出版物提供了关于SARG全球分布情况和基因组特征的更多数据。